Shopify vs PayJunction

Squarespace

Stripe

WooCommerce

Adobe Commerce

PayPal Checkout

ddSuite

Compare Shopify and PayJunction based on features, pricing, verified reviews, integrations & more on GetApp. Find out which software is best for your business in 2026.

Squarespace is the all-in-one platform to build a beautiful website, online store, or portfolio. Drive traffic to your Squarespace website and measure your success with powerful marketing and analytics tools.

Adobe Commerce empowers B2C and B2B brands to boost conversion and go live faster on a flexible, cloud-native platform. It supports rapid growth across brands and markets with scalable catalogs, a native DAM, and a fast, personalized storefront experience that accelerates growth.

Designed for store owners and developers to build & run eCommerce sites, WooCommerce is an extendable, adaptable, open-sourced eCommerce platform for WordPress

Shopify is a commerce platform that allows anyone to easily sell online, at a retail location, and everywhere in between

Activity Dashboard

Catalog Management

Content Management

Customer Accounts

Customer Database

Customer Management

Customizable Branding

Customizable Reports

Customizable Templates

Data Import/Export

Data Security

Data Synchronization

Discount Management

eCommerce Management

Electronic Payments

Electronic Signature

Email Marketing

Email Templates

For Retail

For Small Businesses

Gift Card Management

Inventory Management

Inventory Tracking

Item Management

Mobile Access

Mobile App

Mobile Commerce

Multi-Channel Management

Multi-Channel Marketing

Multi-Language

Multi-Store

Multiple Payment Options

Order Management

Payment Gateway Integration

Payment Options

Payment Processing

Product Catalog

Product Configurator

Promotions Management

Refund Management

Reordering

Reporting/Analytics

Retail Inventory Management

Retail Management

Returns Management

Sales Reports

Sales Tax Management

SEO Management

Shipping Management

Shopping Cart

Social Media Integration

SSL Security

Stock Management

Templates

Third-Party Integrations

Website Management

Shopify

Android

Web-based

iPad

iPhone

Marketing Director

We love that is is really use to use, to manage the products and check the orders. It is very user friendly, which is really helpful when you have a large team.

Marketing specialist 

I love how easy it is to check out. I love there is a card swiping device too so payments are flawlessly done.

Electrical Engineer

Shopify is a popular tool with great support that makes it easy to get started an online e-commerce business. It has also great integration across different platforms like Laptops/PCs and smartphones.

Student

I love using Shopify for my online shops. It´s easy, the variety of products are amazing and is all very easy to buy.

ux designer

I love everything about Shopify, I mean, it has a great price, has amazing themes in terms of design and user experience, shopify's got it all, really, I highly reccomend it.

Teacher

I was astounded and how connected this software is, not only to all social media but to other applications that can make your Shopify journey great and financially fruitful.

Research Assistant

I have had a pleasant experience so far and I highly recommend it to anyone looking for affordable prices.

Freelancer

Shopify is super easy to use and for me, it is the best e-commerce software because of its user-friendliness and variety of options.

Co-Founder

I've been super happy with it and their product only gets better and better as more third-party companies have smooth integrations.

Accountant

Wow, this a great place to sell your products that can be linked to all your social media platforms. It is also easy to setup compared to the other  software available.

Manager

It is easy to set up and maintain, and product management is a breeze. The themes are all great and it is very easy to quickly set up a good looking shop.

owner/manager

Was not very much support on the stubborn aps that refuse to leave when you delete them.

Courier 

It’s really easy to use for any age individual, it’s customer service is a great a help which to me is one of the best and most crucial to a company is better assist your customer.

Most satisfied software and the website ever,categories and edditing methods are perfect and easy as nothing,even for a person who dont know about website creating, im satisfied.

Tier 2 Lead

With the basic knowledge you can create an outstanding website. Shopify offers a very great customer service, so you can clear all of your doubt quickly.

Photographer

Sometimes on the app I have trouble tracking my package either error from the sending company or from the something on my end in not understanding the app to it's fullest.

Designer

Bad practice, leaves a bad taste in the mouth. No other company does that.

Owner/Operator

Everything about this site/software/shopping program. Products weren't what I ordered, the wife had to deal with horrible customer service.

Shopify screenshot: Product page

Shopify screenshot: Orders

Shopify screenshot: App - Orders page

Shopify screenshot: POS - Sell in-person, online or BOTH

Shopify screenshot: Performance Overview

Shopify screenshot: Main admin panel

Shopify screenshot: Mobile app - manage your store from your iPad or iPhone

Shopify screenshot: Mobile dashboard

Freelancers

Large Enterprises

Mid Size Business

Non Profit

Public Administrations

Small Business

Stripe is a comprehensive financial infrastructure platform that enables businesses to accept payments online and in person. It offers a suite of APIs for payment processing, subscription management, fraud prevention, and financial services integration, supporting over one hundred payment methods across multiple currencies. Stripe provides both developer-focused tools with extensive documentation and no-code solutions for businesses without technical staff.

PayPal Checkout is a payment checkout platform that enables retailers to process payments via various payment modes.

ddSuite software from DDC Schweiz allows object data of large infrastructure objects to be viewed from the overall view down to the smallest detail, managed and orders and invoices to be triggered.

PayJunction is a payment gateway & merchant service which provides mid to large scale enterprises with the tools to process all payment types in store or online

ACH Payment Processing

Contact Database

Credit Card Processing

Customer History

Debit/Credit Card Processing

Email Management

Fraud Detection

In-Person Payments

Mobile Payments

Multi-Location

Online Payments

Payment Links

PCI Compliance

Point of Sale (POS)

Projections

Receipt Management

Recurring/Subscription Billing

Search/Filter

Status Tracking

Transaction History

Transaction Monitoring

PayJunction

Admin Assistant

This is very user friendly and if we experience any difficulties we just call and someone is very helpful to assist in problem solving. Everyone has been very supportive and is very helpful.

Billing Manager

It is a great product and they do a great job supporting it. The staff are friendly and professional and always resolve my problems quickly.

President

Support - they are friendly and available when they are needed. I love the kiosk that is provided - we've received numerous compliments about how easy it is to use, and how fast it is.

Operate my own business--owner

I am responsible for managing associations and we had to find a very good company at a good price point. We found Pay Junction and it fitted our needs very well.

PayJunction has been a super convenient and helpful solution with instantaneous access to customer profiles and capture data.

Finance Manager

We have been using it for quite a number of years and it has really helped our business. Would recommend to anyone looking for a wonderful credit card/check processing company.

Owner

There's no support on weekends. They lost Shopify integration and do not have a mobile card reader yet, so I have to use separate companies for those two things.

office Manager

We love the ease of processing and patients love the emailed reciepts.

Office Manager

I was unsure about the paperless concept but now love it. The customer service dept has always been very helpful and easy to access.

Office Administrator/Manager

I like the ease of use with running cards and the user friendly website. It makes it a breeze to run transactions.

VICE PRESIDENT

We get our money fast and it is very easy to use and setup. Support is great and very easy to reach a real person.

Easy enrollment process, good customer service & like the integration into our operating system.

Counseling

I loved that I was able to get a competitive rate.

Customer service has been great. Very easy to use the software once cards are uploaded.

Integration with WooCommerce and the ability to take the system with us to trade shows is a huge plus.

Accounts Payable

Sometimes, it takes too long to process payment and customers have to wait. They, in turn, get frustrated.

Backend Application Developer

It had fantastic customer service which is why we switched to it in the first place but ultimately switched away from it when we got fed up with losing data because there was no http callback.

Sometimes there might a glitch in syncing with sycle but for the most part no real negative opinion.

Shopify vs PayJunction Comparison (2026)

Shopify

PayJunction

Overview

Video & Screenshots

Pricing

User reviews

Key features

Integrations

Alternatives