Patriot Payroll vs Paychex Flex

QuickBooks Enterprise

ADP Workforce Now

Gusto

Paylocity

RUN Powered by ADP

ADP Comprehensive Services

Compare Patriot Payroll and Paychex Flex based on features, pricing, verified reviews, integrations & more on GetApp. Find out which software is best for your business in 2026.

With Gusto, you get modern HR features like payroll, benefits, hiring, management resources, and more — all in one place. Gusto is proud to serve more than 400,000 businesses in the US with a single trusted system, competitive compensation tools, and expert guidance to help you empower your team.

RUN Powered by ADP® helps small businesses automate payroll, file taxes and manage HR with ease. From AI-driven efficiency to expert support, businesses can take care of their teams anytime and anywhere. 

QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

Patriot Software is an online accounting and payroll software designed for small businesses that helps run payroll operations, handle tax filings, create and send invoices, and more.

1099 Preparation

401(k) Tracking

Access Controls/Permissions

Accounting

Accounting Integration

Activity Dashboard

Alerts/Notifications

Approval Process Control

Attendance Management

Audit Trail

Auto Update

Benefits Management

Check Printing

Compensation Management

Compliance Management

Customizable Reports

Dashboard

Data Import/Export

Direct Deposit

Document Management

Document Storage

Employee Database

Employee Management

Employee Portal

Employee Profiles

For Cloud

For Mobile

For Small Businesses

Mobile Access

Multi-State

Onboarding

Payroll Management

Payroll Reporting

QuickBooks Integration

Reminders

Reporting & Statistics

Reporting/Analytics

Self Service Portal

Sick Leave Tracking

Split Deposits

Tax Calculation

Tax Compliance

Tax Filing

Tax Forms

Tax Management

Third-Party Integrations

Time Tracking

Timesheet Management

Vacation/Leave Tracking

W-2 Preparation

Wage Garnishment

Patriot Payroll

Android

Linux

Web-based

Windows

iPad

iPhone

After switching to Patriot payroll software, it was like a breath of fresh air. The customer service people were WONDERFUL and I felt like this was doable.

owner

When i started i made some mistakes and instead of deleting and correcting I run another payroll and that caused headache and costly.

Vice President 

The ease of using the software and how helpful the staff at Patriot are if you need help. They personally will walk you through the steps and make sure you are comfortable before you hang up.

Physician

Their full service payroll is a tremendous value and well worth it. For any questions during initial configuration or for making changes after up and running, Patriot support is outstanding.

Administrative Assistant

The process is very easy to use, trustworthy as well as inexpensive for the quality of service you receive. When needing help from the Support Team they have all been extremely helpful.

Assistant manager

I love Patriot software because it is easy to use and totally reliable. I have used two other services and would now only use or recommend Patriot Software.

C.E.O.

Excellent customer service, easy to use, and easy to set up for the business. Also has the great features to keep up with possible company growth.

Owner

At the time my client liked the affordability of the software. Costs for self service payroll is very affordable which is great for small business.

Director of Grant Procurement and Administration

All our employees are not eligible for the same time off accrual, and the inability to change individual time-off/holiday settings was initially quite frustrating.

Accountant

I love it because it is so easy to use and takes me no time at all each payday to set it up. THE best feature is that is so much cheaper than when I did the payroll manually in house.

Treasurer/Secretary

I love that Patriot calculated payroll and took care of reporting to the state for me. I didn't have the care to figure out the learning curve of what is all required from the state.

The UI - it is super easy and user friendly. The FAQ - it is one of the best FAQs and super accurate.

President 

I am very pleased and happy because the excellent support which comes with the program.

President

The set up was awful and Patriot left me on an island and did not finalize anything and failed to file any state reports.

book keeper

I'm very happy with Patriot Payroll. They take care of all payroll filings, and they have great customer service.

My biggest complaint about the software is the lack of support in non-timesheet payroll.

National Commander

Because we started mid year, the fact that Patriot Software helped integrate our full payroll records was a fantastic benefit to us.

Managing Member

Pleasant to look at and navigate the UI; has an intuitive  design that usually allows one to figure things out quickly; the reports are top notch; and integrates with QBO & XERO.

Patriot Payroll screenshot: Patriot Payroll Step 2; Pay employees.

Patriot Payroll screenshot: Patriot Payroll Step 1; Enter employee hours.

Patriot Payroll screenshot: Patriot Payroll Step 3; Print paychecks or pay stubs. 

Patriot Payroll screenshot: Patriot Software is mobile friendly, and Patriot Payroll® has a mobile app for W-2 employees!

Freelancers

Large Enterprises

Mid Size Business

Non Profit

Public Administrations

Small Business

One unified platform for HR, Finance, and IT. Connect people, processes, and data. Automate tasks and drive business growth. 

ADP Workforce Now is a cloud-based human capital management, talent management, and benefits software built for midsized and large businesses.

ADP is the HR, pay, and benefits outsourcing partner that extends your capacity so you can deliver more strategic impact to the business. The Comprehensive Services platform provides expert support for a wide range of workplace challenges, from pay and benefits administration to talent management.

Paychex Flex® simplifies payroll and HR with cloud-based technology, automated taxes, and powerful tools like recruiting, employee engagement, perks, and analytics. Access it from anywhere and empower your team, save time, and get 24/7 support for your growing business.

360 Degree Feedback

Applicant Tracking

Assessment Management

Attendance Tracking

Background Screening

Benefits Dashboard

Billable & Non-Billable Hours

Biometric Recognition

Calendar Management

Candidate Management

Compensation Plan Modeling

Data Security

Electronic Forms

Employee Engagement

Employee Onboarding

Employee Scheduling

FMLA Administration

For Accountants

For PEO/ASO

HR Management

Insurance Management

Internal HR

Interview Management

Job Posting

Learning & Development

Leave Tracking

Market Data Analysis

Mobile App

Offboarding

Online Benefits Enrollment

Online Time Tracking

Orientation Workflow Management

Overtime Calculation

Payroll Outsourcing

Performance Management

Real-Time Reporting

Recruitment Management

Time Off Management

Time Off Requests

Training Management

Web-based Deployment

Workflow Management

Workforce Management

Paychex Flex

Executive Coordinator

The implementation team was great when we were getting this started as they were very helpful and answered all of our questions.

Office Manager

This product was recommended by our CPA who uses it for his own office. That recommendation was good enough for us and it has proven to be an invaluable asset to our business.

VP Customer Success

I never criticize publicly about an organization but this one was so very unprofessional and even made worse by the outrageous fees they charge.

Recruiter

Great service, great app, great website. User friendly, leaves me with no questions after checking my breakdowns every pay period.

Marketing Director

It can be a problem to login to the work site which is frustrating when trying to clock in or clock out on time.

Director of People Operations

Just about everything else. Its not user-friendly, its customer service is terrible and we get so many complaints for employees, as the admin I have limited resources to help.

Human Resources

We are a month into the implementation process with Paychex and just processed our very first payroll. So far the experience with Paychex and their implementation team has been outstanding.

Analyst

It's easy to use daily, and everything is very easy to find. I like that I can find any documents I need to sign, and complete them with ease.

Marketing

I guess the positive is that it looks nice visually. It gives you the info you are looking for with some searching.

Paychex Flex offers a variety of functions and features that are ideal to our company. The on boarding was easy thanks to their great support team.

Marketing Associate

Paychex Flex allows you to see all of your paychecks in one place, see deductions, tax documents,  as well as other information like your employment anniversary. The app is wonderful as well.

Lead recruiter

Overall expereince was great. Userfriendly and worth the money.

HR Specialist

Then I started a new job where they use PayChex, talk about old and outdated. I hate that I literally have to ask someone to change the taxes for one of our employees and I can't do it myself.

Virginia Field Organizer

It is a perfect portal for all those things and more. It's really easy and intuitive to move from one dashboard to the next.

Director of HR

For the most part, Paychex Flex is a wonderful integrated HRIS product. It is truly full cycle, from recruiting to succession planning, training, through the end of employment.

As an employee user, I found Paychex to be the most difficult software of this type to use. It's clunky and hard to find what you are looking for.

Assistant

I like that it is easy to use, is an app on your phone, where I am able to have access to all of my money management in one place.

Controller

However, Paychex does promote these positions very rapidly. It seems like any time I am assigned a knowledgeable payroll account manager, they are promoted.

Patriot Payroll vs Paychex Flex Comparison (2026)

Patriot Payroll

Paychex Flex

Overview

Video & Screenshots

Pricing

User reviews

Key features

Integrations

Alternatives