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Top Rated Mental Health EHR Software with Non profits - Page 2

Last updated: May 2026

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89 software options

Cliniko logo

Medical practice management for healthcare practices

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Cliniko is a medical practice management system that allows healthcare practices of any size to manage patients & practitioners across multiple locations. Features include multi-platform online booking, scheduling, billing & invoicing, patient histories, real time alerts, and statistical reporting.

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TheraPlatform logo

Cloud-based HIPAA compliant video conferencing software

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TheraPlatform is a cloud-based video conferencing platform that helps therapists and behavioral health professionals streamline communication with clients and offer virtual therapy sessions.

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Alleva logo

We're the friendliest EMR platform around. Book a Demo!

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Our state-of-the-art platform will take your center into the 21st century and streamline the entire process of EMR. Our platform provides more efficient workflows, reducing burn-out, and improving the quality of care. Insights offers real-time data for better business decisions and easier reporting.

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MedEZ logo

Electronic health record (EHR) suite

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MedEZ is a perfect fit for Behavioral Healthcare facilities, Inpatient and Outpatient IOP / PHP programs & Substance Abuse clinics.

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Checkpoint EHR logo

All-in-one behavioral patient care.

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Checkpoint EHR is a 3-in-1 solution for behavioral patient care, offering electronic health records, clearinghouse solutions, and billing services. It provides a trusted and simple-to-use electronic health record software with features like unlimited users, hands-free billing, client reminders, and dedicated support at no extra cost.

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Exym logo

Giving our customers the freedom to focus on care.

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Exym is an intuitive, user-friend EHR software solution that tracks everything your behavioral health agency needs. Easily manage your patient data, progress notes, clinician activities and billing.

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Healthie logo

HIPAA compliant health records for providers

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Healthie is a HIPAA-compliant electronic health record platform for health and wellness providers, including private practices, group practices, and digital health startups. It offers cloud-based charting, scheduling, billing, telehealth, patient engagement tools, and workflow automation. Features include an AI scribe, multi-provider support, insurance management, and integrations with third-party apps like wearable devices and business intelligence tools.

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Nexus EHR logo

Modern, Certified EHR with Native AI & Rapid Rx

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Clinical depth for Psychiatry. Features narrative AI Scribing for SOAP/DAP notes, integrated EPCS/PDMP for controlled substances, and unique group therapy intelligence. Launch HIPAA-compliant telehealth and benefit from automated CPT suggestions for time-based billing.

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PIMSY Mental Health EHR logo

The EHR built from the ground up for behavioral health.

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ONC-Certified EHR built for mental health since 2007. Flexible documentation, Wiley Treatment Planners, integrated telehealth, ePrescribing, and a managed RCM service that delivers a 96% net collection rate. Built for the specialty, not adapted to it.

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Trac9 Informatics logo

Mental Health EHR software

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Leading the way in rehab success with predictive analysis and personalized care. Our software transforms clinics, providing comprehensive assessments and individualized plans for sustained sobriety. Join us in shaping a brighter future for recovery.

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NueMD logo

Electronic health record software for medical practitioners

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NueMD helps medical practices streamline the administrative operations to spend more time with patients and less time on paperwork. It helps create patient records, scan and attach insurance and ID cards and instantly verify insurance eligibility.

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DENmaar Guardian logo

DENmaar wants to be a true partner in your practices growth.

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DENmaar is different. Our EHR & Insurance Revenue Cycle system is designed for 6+ MH/SA providers, including medical EMR for Psychiatry and e-prescription, a wide variety of therapy progress notes - including Wiley Planners. We are reimbursed by claims revenue produced. Plus credentialing services.

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Prevounce logo

Software for remote patient monitoring & care management

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Prevounce is a wellness platform that supports practices and practitioners with chronic care management, remote patient monitoring, and Medicare preventive services platform. It streamlines the delivery of preventive services through eligibility verification, automated patient outreach, easy-to-use checklists, documentation, and billing support.

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MedClarity logo

Cloud-based revenue & medical practice management solution

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MedClarity is a medical billing and practice management solution that helps to reduce insurance claim denials, schedule appointments, and manage revenue

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Enablemypractice logo

Cloud-based EHR solution for medical professionals.

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Enablemypractice is an EHR (electronic health record) solution, which helps small to large healthcare organizations manage patient engagement, online billing, appointment schedules, medicine databases, and more. The platform provides several features such as communication tools, visit management, artificial intelligence (AI), reporting, electronic prescriptions, chronic care management (CCM), custom templates, live chat, mobile application, and bed management.

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Sunwave logo

Behavioral health tool for substance abuse treatment centers

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Sunwave is a cloud-based behavioral health software designed to help substance abuse treatment centers and mental health facilities manage patient records, admissions, billing, and more.

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blueBriX logo

Mental health software for the healthcare sector

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BlueEHR is a mental health software that helps businesses in the healthcare sector deploy custom health IT solutions to personalize the electronic health records (HER) system. The platform enables managers to track clients’ health records and treatment status on a unified interface.

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MindWise Health logo

Cloud-based mental health platform

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Mindwise Health’s Mental Health EHR is designed to streamline clinical workflows for behavioral health professionals. It offers secure patient management, clinical documentation, treatment planning, e-prescribing, and telehealth integration, all within a HIPAA-compliant platform.

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Juno EMR logo

Web-based EMR developed from the open source OSCAR McMaster

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Juno EMR provides Canadian medical professionals with a full-service, externally hosted, cloud based EMR solution developed from the open source software OSCAR McMaster EMR. Juno EMR fully integrates with provincial medical billing & labs systems as well as PHR, patient engagement, eFaxing, & more.

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Community CareLink logo

Case management software - from intake to impact.

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Streamline care coordination with Community CareLink. Track outcomes, streamline reporting, and improve efficiency. Book a demo today!

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RipsyTech logo

Helping Make Practice Perfect

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User-friendly EHR featuring advanced note-taking, outcome measurement, seamless billing, and robust security. Designed for efficiency and informed decision-making.

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Flex-HIS logo

Electronic medical records and hospital management software

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eHealthFlex is a hospital management software which helps healthcare organizations manage patients, billing, appointment scheduling, consultation, and more. The hospital information management system lets users handle attendance, in-patient and out-patients, lab information, pharmacy, and inventory.

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AccuMed logo

Behavioral health and substance use EHR solution

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AccuMed is a behavioral health and substance use EHR solution that includes clinical EMR, billing, reporting, practice management, patient portal, and telehealth processes. It includes a configurable rules engine, a workflow engine, security profiles, configurable forms, notes, treatment plans, reports, and more.

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Claimocity logo

Practice management software with claims tracking tools

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Claimocity is a practice management software that helps healthcare institutes track claims, manage finances, monitor performance, collect data, and more. The front desk module enables receptionists to manage appointments, handle patient charts, and schedule facilities, doctors, and patients.

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PertexaIQ logo

Automatic progress note generation for physicians

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Radekal is an electronic health record (EHR) & automatic progress note generation solution designed to streamline the process of recording patient examinations

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