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Top Rated Warehouse Management Software with Shopify - Page 2

Last updated: May 2026

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170 software options

ShippingEasy logo

Online shipping automation pla eCommerce seller

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ShippingEasy is online shipping fulfillment software for eCommerce sellers that want the best postage rates and automate back-end shipping processes.

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Order Time Inventory logo

Cloud-based order and inventory management solution

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Order Time Inventory is a cloud-based order and inventory management solution designed to help businesses streamline processes related to sales orders, lead generation, purchasing, production scheduling, warehousing and more from within a unified platform.

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Craftybase logo

Smarter inventory for growing makers and product brands.

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Simplify warehouse management with cloud-based stock tracking. Craftybase helps you organize inventory, manage locations, and fulfill orders smoothly—whether you work from home or a growing warehouse.

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Kechie logo

All-in-one cloud-based ERP & Inventory Management for SMBs

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The Multi-Warehouse Fulfillment solution tracks and controls the movement and storage of materials, as well as, the fulfillment and shipping within multiple warehouse locations.

With Kechie’s intelligent order tracking, multiple warehouses are able to ship products without making mistakes.

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Wherefour logo

Modern and easy-to-use inventory management/traceability ERP

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Wherefour is a cloud-based enterprise resource planning (ERP) solution designed to assist process manufacturers manage inventory, forecast future need, plan production, manage customer orders, and more. Key features include batch management, recipe management, and lot-coded traceability.

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HandiFox logo

Mobile inventory tracking & sales management for QuickBooks

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HandiFox is a QuickBooks Desktop and QuickBooks Online-integrated mobile inventory tracking and sales management system for small and mid-sized businesses

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CartonCloud logo

Logistics software made by, and for logistics people.

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Warehouse management system (WMS) with real-time inventory control, mobile barcode scanning, guided picking workflows, and audit-ready reporting. CartonCloud improves warehouse accuracy, productivity, and scalability across single or multi-site operations.

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ShipHawk logo

Automate the world behind the buy button

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Advanced warehouse and fulfillment automation for eCommerce shippers.

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Shippingbo logo

e-commerce logistics software

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Shippingbo is the all-in-one logistics solution that helps companies increase their e-commerce performance. The solution can connect to over 300 sales sources and help ship mass-orders.

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Magestore logo

The world's #1 Magento-native POS.

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Magestore is the world's #1 Magento-native POS. Magestore POS ensures real-time & online-offline integration for Magento merchants. With Magestore POS, you can leverage Magento’s powerful capabilities to drive more sales in offline stores and grow your business.

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C2W Inventory Management System logo

Inventory tracking, control, and management system

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C2W Inventory Management System consolidates inventory, sales, purchasing, and reporting into a unified platform, offering real-time stock updates and multi-warehouse functionality. It includes a mobile SmartScan barcode system to streamline inventory processes. The solution includes automated reorder point settings and is compatible with Geek+ Robotics automation for management.

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Ordoro logo

Cloud-based order & inventory management solution

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Conquer ecommerce complexity.

Three handy software apps for inventory, shipping, and dropshipping make selling online a breeze. Start your 15-Day FREE TRIAL today!

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ERPAG logo

ERP for small and mid-sized companies

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ERPAG is a cloud-based ERP system for small and mid-sized companies, which covers sales, purchasing, inventory, production, payroll, business analysis, and more

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Shipfusion logo

Ecommerce order fulfillment for rapidly scaling DTC brands

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Get the power of a fully managed WMS without owning a facility. Shipfusion’s in-house 360 custom portal software offers barcode-level tracking, custom project flows, and real-time data across a national warehouse network.

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Descartes Peoplevox logo

Warehouse management software for eCommerce businesses

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Peoplevox WMS is a SaaS-based warehouse management system for fast moving e-commerce businesses that run their own warehouses.

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Stok.ly logo

ePos, stock control & multi-channel listing solution

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Stok.ly is a cloud-based platform designed to help small to midsize retailers manage operations related to electronic point-of-sale, stock control and multi-channel listings. The platform enables users to update data across all eCommerce and other digital platforms in real time.

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Multiorders logo

Multichannel Order, Inventory and Shipping management tool.

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Multiorders helps small and medium-sized eCommerce businesses automate order fulfillment, manage inventory, and track sales across all channels from a single platform, saving time and boosting revenue.

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Newline WMS logo

Warehouse management solution

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Newlines WMS is a cloud-based warehouse and inventory software that helps manage goods in and put away, orders, pick, pack and dispatch. Features include item and order management, stock movements and transfers and bonded stock functions.

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Flowtrac logo

Warehouse and inventory management solution

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FlowTrac is a warehouse management solution, which helps organizations manage asset tracking, inventory management, manufacturing & more. It lets users assign assets to employees or customers, monitor status via check-in/out details & receive alerts bout return dates.

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Digit logo

Cloud-based manufacturing and inventory management platform

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Digit is a cloud-based ERP platform that helps small manufacturers manage inventory, production, sales, purchasing, and fulfillment.

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MPX logo

Simplifying Business Operations.

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MPX - Your BOSS (Business Operating System as a Service) designed to Simplify Business Operations.

Managing your business shouldn’t need multiple tools and endless tabs. Our business operating system brings everything into one seamless system.

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Leanafy logo

Inventory management system

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LEANAFY is a feature-packed yet easy-to-manage inventory management solution. It is fully customizable & accessible across all devices.
Leanafy is an inventory management system that caters to different types of customers such as B2B, 3PL, eCommerce, traders, manufacturers, and distributors.

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GroovePacker logo

Barcode inventory control & scan pack quality control system

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GroovePacker is a barcode scanning and warehouse packing verification system designed to eliminate pick & pack errors and mis-ships

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Agiliron logo

Cloud retail management system

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Agiliron is a retail management system which enables businesses of all sizes to manage all of their orders, inventory & CRM records from multiple sales channels in one location with a range of tools including multi-channel eCommerce, POS, marketplace integration, business intelligence, & more

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SkuSuite logo

Inventory Management & Order Management Software Solution

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SkuSuite is the cloud warehouse management & order management software solution essential to the growth of your business. Increase productivity & sales, streamline & automate operations, saving time & money with our robust e-commerce software solution. We specialize serialization & IMEI tracking!

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