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Top Rated Applicant Tracking Software with Paychex flex

Last updated: May 2026

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21 software options

Homebase logo

Homebase

All-in-one platform to manage hourly team

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Easily post jobs, track applicants, and hire faster with Homebase’s simple, built-in applicant tracking tools for small businesses.

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ApplicantStack logo

ApplicantStack

Applicant tracking system (ATS)/employee onboarding

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?Since 2009, 2,500+ companies have chosen ApplicantStack: the affordable, easy-to-use Recruiting and Onboarding system to automate and streamline their process.

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JobScore logo

JobScore

Simplify, Optimize & Improve your Hiring

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The original all-in-one recruiting solution for companies with 2 to 2,000 employees. Our intuitive ATS helps you find, attract, assess and hire great people. We've proudly been eliminating recruiting busywork since 2004.

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AvaHR logo

AvaHR

Recruitment marketing & applicant tracking

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ViVAHR is an applicant tracking software (ATS) with tools to create brand awareness, engage possible applicants, and convert & nurture successful candidates

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Built logo

Cloud Based Solution for Time Off Tracking, Org Chart & More

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Track applicant sources while smoothly managing all aspects of the hiring process. Invite hiring participants, quickly qualify or disqualify applicants and move them through the customizable work flow created by you. Store provided documents and files to attach to hired applicants employee profile.

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Wizehire logo

An online hiring platform that helps small businesses grow.

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Wizehire simplifies recruiting with its advanced Applicant Tracking System. Post job ads to 100+ job boards with one click. Our ATS for recruiting has a powerful centralized dashboard with an efficient filtering, sorting, and drag-and-drop facility. Super easy to use. Trusted by 18,000+ businesses.

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Connecteam logo

Enhance employee management with the only all-in-one app

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An all-in-one employee app that's both powerful, affordable and easy to use, especially for the mobile workforce.

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Criteria logo

Better talent begins with better insights.

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Keep your candidates in the loop with regular emails and reminders. If you need sophisticated candidate management tools such as hiring pipelines, automated actions, notes and ratings, they're all available within the platform.

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Deputy logo

Staff scheduling and attendance tracking solution

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Deputy is an all-in-one employee scheduling, time & attendance, tasking and communication platform, with mobile apps which allow users to manage teams on the go.

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ClayHR logo

YOUR HR APPLICATION FRAMEWORK

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ClayHR’s applicant tracking system manages, tracks the candidates, and also coordinates in the whole process of selection. It begins by publishing the open positions on candidate-friendly job portals. Shortlisting the best candidates, post which conducting interviews, and selecting the best-sui

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CDLSuite logo

Onboarding and applicant tracking software

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Combining automation, visibility, real-time alerts, and ease of use into one intuitive platform. CDL Suite delivers the tools, controls, and live support you need to manage DOT compliance and driver qualification files without all the complexity.

CDL Suite helps you get and stay DOT compliant!

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Workforce.com logo

Hiring, scheduling, time tracking, HR, and payroll solution.

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Workforce.com is a cloud-based, all-in-one solution for shift-based businesses looking to manage scheduling, attendance, HR, and payroll.

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Ashby logo

Cloud-based recruiting and applicant tracking system

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Ashby is a cloud-based recruiting platform for companies that want to streamline their recruiting process and find great talent.

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SmartSearch logo

Hire Better. Faster. Smarter.

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SmartSearch is a leading global talent acquisition and staffing management software platform that enables companies to effectively identify, recruit, onboard, and nurture top talent.

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Senegal Software logo

Staffing agency and event management platform

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Senegal Software is a staffing management platform specifically designed for the event industry. It helps agencies increase their productivity, manage clients, and win jobs by providing a complete system that manages an agency's back office needs and includes a fully integrated payment system.

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ClearCo logo

Unified talent platform for the entire talent lifecycle

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A robust Applicant Tracking System (ATS), AI-assisted resume screening, and an AI Notetaker for interview intelligence. It provides shared visibility for hiring teams, structured approval flows, faster decision-to-offer cycles, and embedded compliance controls for consistent candidate evaluations

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Harri logo

The end-to-end platform for frontline businesses.

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Streamline your recruitment efforts with our applicant tracking system built for the frontline. Harri's applicant tracking features mobile-friendly candidate management, timely communications, and effortless interview scheduling.

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PCRecruiter logo

Recruitment CRM / ATS for recruiting and placement agencies

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Use PCRecruiter to view your candidates in a pipeline, move them through predefined stages, send communications and score & compare applicants.

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WebHR logo

Human resources and employee scheduling solution

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Application Tracking is available as one of core Add-On within WebHR with Jobs Portal that can be embedded to your company website. Indeed, LinkedIn & more

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myStaffingPro logo

#1 in Quality of Service

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Use myStaffingPro to manage the hiring process, from promoting jobs & building a talent pipeline, to qualifying candidates, obtaining feedback, & hiring.

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JazzHR logo

Recruiting software for small & midsize businesses

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JazzHR is best-in-class recruiting software that replaces time-consuming and manual hiring tasks to help growing companies find and hire the right talent, fast.

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