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Top Rated Medical Accounting Software with Freelancers

Last updated: June 2026

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49 software options

Sage Intacct logo

Best-in-class Cloud ERP for Finance

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HIPAA-compliant healthcare accounting with departmental costing, revenue cycle, multi-location consolidation, EHR integrations, audit trail.

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QuickBooks Enterprise logo

Enterprise accounting, FSM and inventory management solution

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QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

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FloQast logo

AI-enabled accounting automation solution

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FloQast is an accounting automation solution that helps accountants close their books faster, more accurately and collaboratively. It gives an automated, integrated view of financial data to help reduce errors and save time

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Daxko Operations logo

Membership management software for non-profit organizations

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Complete operations software for member-based nonprofits - integrating programs, billing, and check-ins in one secure system.

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TopNotepad logo

All-in-one software for managing small businesses

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TopNotepad is a cloud-based business management solution for freelancers and small businesses, offering invoicing, accounting and indirect tax (Sales Tax/VAT/GST) compliance solution.

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ActivityHD logo

ERP software for accounting and business management

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ActivityHD is a flexible and comprehensive ERP system that offers customizable tools and management for various complex processes. The software assists businesses of all sizes with payroll processing, accounting, business management and more.

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Prophix One logo

Automate & streamline corporate performance management

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Prophix allows organizations to automate & integrate their budgeting, planning, forecasting, financial consolidation, & reporting activities on one platform

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QuickBooks Online Advanced logo

Accounting & business management for small businesses

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QuickBooks Online Advanced is a web-based accounting & business management solution which enables small businesses to track sales, inventory, financial accounts & payroll from a single dashboard

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SBS Financials logo

Accounting software for the financial businesses

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SBS Financials is an accounting software designed to help businesses plan and manage budgets, approval workflows, billing, invoicing, and bank reconciliations. The platform enables managers to access financial information and track progress against key performance indicators (KPIs).

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SAP Business ByDesign logo

Cloud ERP solution for small and medium sized businesses

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SAP Business ByDesign is an integrated business management solution delivered on a subscription basis through the cloud. SAP Business ByDesign can be localized for 130 different countries and for several specific industries, including manufacturing, wholesale distribution, PSA, non-profit, and more.

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NextProcess logo

Accounts Payable software for automated invoice processing

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NextProcess accounts payable (AP) software integrates with existing ERPs to accurately automate invoice processing, route approvals and add vendor self-services

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ALTO Accounts Payable logo

Procurement and accounts payable automation solution

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ALTO Accounts Payable solution by Innovation Centric Group is a comprehensive procurement and accounts payable automation solution. It features robotic and AI-enabled workflows to streamline processes like invoice submission, approvals, sourcing, and payments.

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AccountsIQ logo

Cloud-based accounting software for medium-sized businesses

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AccountsIQ is cloud-based accounting software that assists businesses in construction, retail, hospitality, and other sectors with cash flow forecasting, budgeting, and financial reporting.

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SapphireOne logo

Enterprise Resource Planning software

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SapphireOne streamlines medical accounting with tailored features for healthcare, ensuring accurate billing, invoicing, and compliance. Real-time data integration enhances efficiency in managing patient accounts and claims. Customisable reports offer insights, while scalability supports growth.

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CashManager by Accomplish logo

Online & desktop accounting software

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CashManager is an online & desktop accounting software which offers tools for customer & supplier invoicing, bank reconciliation, quoting, reporting, and more

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Rerun logo

Recurring billing. Simplified.

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Rerun is for any small business, organization or association that wants to automate their recurring, subscription or membership billing.

Rerun integrates with AccountEdge, QuickBooks and Xero to help your business run efficiently.

Get started for FREE.
Pay only for what you process.
2.9% + $0.30 per transaction.

Free 30-day trial.
No credit card required.

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AcuSheet logo

Simple Accounting Software

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AcuSheet is easy to use accounting and invoicing software to track and manage your finances so you can focus more on your business.

AcuSheet helps businesses manage accounts in the background to ensure compliance and also generates financial reports.

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Scopevisio logo

Simplify your daily business with Scopevisio.

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Scopevisio is the cloud-based business software that automates commercial processes, aligns your company more profitably and thus makes it fit for the digital future.

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R4 Enterprise logo

Enterprise resource planning (ERP) solution

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R4 Enterprise is an enterprise resource planning (ERP) solution that helps businesses streamline operations related to inventory management, manufacturing execution, financial planning, and more on a centralized platform. It enables staff members to utilize the built-in CRM tool to track sales processes and access customer information to optimize overall businesses operations.

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Xledger logo

Empower ambition with Xledger.

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Xledger is a true cloud finance management platform, founded in 2000, and trusted by 100,000+ users worldwide. It automates accounting, unifies multi-entity reporting, and delivers real time insights, helping organisations modernise finance and outperform traditional ERPs

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Access Financials logo

Accounting and financial reporting software

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Flexible financial management software that moves with your business.
Access Financials brings together feature-rich accounting software with projects, procurement, sales, and operations into one powerful financial system capable of managing your organisation’s unique needs, today and tomorrow.

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Sage 50cloud Pastel logo

Effortless accounting for growing businesses.

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Sage 50cloud Pastel Partner is a powerful desktop accounting solution connected to the cloud, offering in-depth stock and reporting features. It provides smart cloud-connected accounting software with productivity-boosting features like direct bank feeds, cloud document storage, and integrated payments. Sage 50cloud Pastel Partner helps growing businesses run their operations more efficiently with its time-saving solutions for managing accounting, invoicing, cash flow, inventory, and VAT.

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Flexi Software logo

Accounting Solutions That Power Business

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Flexi combines the strength of an accounting platform with flexibility and support to meet unique business needs. The suite of accounting and workflow automation solutions have helped enable brands to simplify and automate accounting for over 30 years.

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AccuFund Accounting Suite logo

Online and Onsite Accounting Software for Nonprofits & Govt

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AccuFund’s complete nonprofit financial management system improves all critical aspects of your nonprofit, from budget development to grants management to payroll and HR and accounts payable, selecting the modules that your nonprofit needs now and add others in the future as needs evolve.

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Sage 500 logo

ERP solution

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Sage 500 is designed to run every business function at peak efficiency. It provides customizable enterprise resource planning software and deliver the insights needed to realize the goals of a progressive business.

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