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Top Rated Billing and Invoicing Software with Magento commerce

Last updated: June 2026

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28 software options

Paystand logo

B2B payment automation platform for finance teams

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Optimize your Billing and Invoicing with Paystand's automated platform. Enhance efficiency with click-to-pay and collections workflows. Enjoy zero-fees on the Paystand Network or choose from payment options like eCheck, ACH, and credit cards.

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Xero logo

Cloud-based accounting software for small businesses

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Xero is an award-winning online accounting software with billing and invoicing solutions designed for small business owners and accountants, available on any computer or mobile device with an internet connection. Easily manage your cash flow, bills, and invoices all in one place.

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EBizCharge logo

Accept payments faster in your ERP, CRM & eCommerce platform

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EBizCharge Billing and Invoicing Software allows your customers to process payments online securely and remotely from anywhere.

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PayJunction logo

Payment processing for mid-large scale businesses

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PayJunction is a payment gateway & merchant service which provides mid to large scale enterprises with the tools to process all payment types in store or online

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Fortis logo

Embedded payments and invoicing for B2B workflows

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Fortis is a payment processing and invoicing solution that helps businesses receive payments, monitor transactions, capture eSignatures, send payment requests, and more on a centralized platform. It enables team members to create one-time and recurring invoices in compliance with PCI-DSS guidelines.

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Vepos logo

ERP software for the service and trade industry

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Vepos is an ERP app designed for all SMEs, although it's specialized with features for the service and trade industry. The ERP platform allows customization by offering a range of different add-on modules. Companies can create customized systems and integrate Vepos with existing POS applications.

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Balance logo

B2B checkout platform

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The first consumer-grade checkout experience for B2B. Offer buyers Net Terms, ACH/wire, check, CC, and installment methods - all in seconds.

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HotelFriend logo

Hospitality operations platform for hotel management

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HotelFriend is an all-in-one operations management solution for hotels and vacation properties, with tools for managing bookings, accounting, housekeeping, departments, services, promotions, and more, including communication features and a mobile app for interacting with guests

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SalesBinder logo

Inventory management solution for SMBs

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SalesBinder is an inventory management platform that helps businesses manage stock, invoices, purchase orders, estimates, and more. It comes with an administrative dashboard, which enables users to monitor sales activities, monthly revenue, and account statistics via actionable analytics.

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Dolibarr logo

Solutions for On-line businesses

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Dolibarr is a business software suite to manage your activity (contacts, invoices, orders, products, stocks, agenda, emailings, and more...).
It's an opensource and free software designed for companies, foundations and freelances.
Available as a Cloud solution on On premise.

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Stitch Labs logo

Inventory Management Built for Modern High-Growth Brands

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Stitch is an inventory and order management platform built for modern, high-growth brands.

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SubscriptionFlow logo

Subscription management software to manage plans & billing

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Manage your billing, invoices, and payment cycles with ease. Track due amounts, automate recurring charges, handle refunds, and access detailed billing history keeping your subscription finances accurate and organized.

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BlueSnap logo

All-in-one payment platform

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BlueSnap is an all-in-one payment platform that offers tools including online and mobile checkout, subscription management, invoicing, payment processing, POS management, unified commerce, and more. It allows businesses to process payments online and track past transactions.

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Heartland Payments+ logo

Payment processing software for hospitality sector

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Heartland Payment Processing is a cloud-based solution that helps businesses in hospitality, medical, government and other sectors accept in-person and online payments via flexible methods, including credit or debit,EMV chip cards, digital wallets and more.

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FreshBooks logo

Invoice and accounting software tailored to small businesses

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FreshBooks lets you create, send & track invoices, as well as create expenses, send late payment reminders and account statements, and set up recurring billing.

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authorize.net logo

Payment processing across multiple channels

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authorize.net supports payment processing by helping businesses accept credit card and eCheck payments online, in person, via mobile devices, and more. The product offers a range of features, including online payments, mobile point of sale, virtual point of sale, phone payments, eCheck payments, digital invoicing, and fraud protection. It provides account updater and recurring payments capabilities to help businesses manage payments.

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Zoho Inventory logo

Order and inventory management for growing businesses

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Zoho Inventory streamlines operations for businesses, enabling them to manage their inventory, sales & purchase orders and shipments more effectively.

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billage logo

Cloud-based invoicing and CRM software for SMBs

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billage is an online CRM and client billing & invoicing solution for freelancers, micro-enterprises and small businesses

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Gofrugal logo

ERP solutions for retail, restaurants & distribution

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GOFRUGAL offers retail, restaurant, distribution and Enterprise businesses a range of ERP and Point of Sale (POS) solutions suitable for multiple trades, with a cloud-based option boasting multi-store management, inventory control, purchase automation, BI reporting & data syncing for offline access

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QuickBooks Online Advanced logo

Accounting & business management for small businesses

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Automate billing and invoicing with customizable templates, batch processing, and real-time payment tracking for efficient operations.

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1CRM logo

Doing Business, Better

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Use 1CRM to create custom quotes & invoices to match your branding, set up recurring invoices, and track bills, payments & expense reports.

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Teamleader logo

Sell, bill and organise work in one place.

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Invoices, quotes, CRM, and planning. Manage your business easily in one place. Over 20,000 entrepreneurs and their teams hand over their paperwork to Teamleader's business software.

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2Checkout logo

Online payment processing and billing platform

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Online businesses around the world sell more every day with 2Checkout payment processing. We're here to help you truly "go global" and offer a local buying experience to your customers.

Our checkout experience maximizes conversions by adapting to local languages, currencies and payment methods. It also reflects your brand, which buyers trust.

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Saasu logo

Small business online accounting

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Online invoicing, customer invoice portal, recurring billing, recurring credit card charges with your gateway.

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Sage Intacct logo

Best-in-class Cloud ERP for Finance

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Ensure your purchasing team is able to place the right orders at the right time for the right price with Sage Intacct

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