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Fund Accounting Software with Invoice Management (2026)

Last updated: April 2026

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Key features of Fund Accounting Software

Based on GetApp's analysis of verified user reviews collected between July 2021 and August 2024.

  • Bank Reconciliation: Users find bank reconciliation straightforward and appreciate detailed reports and clear delineation of cleared and uncleared items. 97% of reviewers rated this feature as important or highly important.
  • Financial Reporting: Reviewers value customizable and flexible reports for transparency and communication, applicable for both internal and external stakeholders. 95% of reviewers rated this feature as important or highly important.
  • General Ledger: Users highlight the ease of tracking, exporting transactions, and making adjustments, which simplifies financial management. 95% of reviewers rated this feature as important or highly important.
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34 software options

QuickBooks Online logo
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Accounting and business management software

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QuickBooks Online is an all-in-one online business software designed to help manage business finances. The platform is built to scale businesses, unlocking insights and providing the functionality of a larger team, all on one integrated platform.

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Dynamics 365 logo
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ERP and CRM applications from Microsoft

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Xero logo
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Cloud-based accounting software for small businesses

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Xero is an award-winning online accounting software designed for small business owners and accountants, available on any computer or mobile device with an internet connection. Simplify business admin and get a range of financial insights to help you make better decisions for your business.

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Sage Intacct logo
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Best-in-class Cloud ERP for Finance

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Sage Intacct is the AICPA-preferred cloud fund accounting solution for nonprofits. Automate grant tracking, activity-based budgeting, and FASB ASC 958 reporting. Gain real-time visibility with multi-dimensional GL and integrations for donor CRMs, purpose-built for mission-driven organizations.

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MoneyMinder logo
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Simple accounting software for volunteers.

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Simple nonprofit accounting software for volunteer-based groups (PTAs, PTOs, Booster Clubs, Sports Teams, Scouts, Service Clubs, etc.)

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Aplos logo

Aplos: where every dollar finds its purpose

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Aplos provides the robust accounting framework necessary to track restricted vs unrestricted funds and generate comprehensive, auditor-friendly reports. Our features are crafted to aid budgeting, automate complex allocations, and provide real-time insights into your financial health.

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Accounting Seed logo
Category Leaders

Accounting and analytics software built on Salesforce

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The strain of donation management and fund accounting is over. Choose an accounting solution that is integrated to Salesforce for your nonprofit organization. Visit: https://www.accountingseed.com/solutions/business-need/salesforce-accounting-software/

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Blackbaud Financial Edge NXT logo

Cloud fund accounting software for social good organizations

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Financial Edge NXT delivers comprehensive fund accounting tools that allow organizations to streamline financial processes and demonstrate accountability

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CommunitySuite logo

Fund accounting and grant management software for nonprofits

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CommunitySuite is a cloud-based grant management software, which helps nonprofits and community foundations manage donations and fund disbursement. Features include bank reconciliation, donation history tracking, tax receipt creation, budget planning, cash management, and reporting.

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MYOB Business logo
Category Leaders

Online accounting & payroll for every business

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Cloud based accounting software to streamline financial reporting, automate payroll, client management and all your accounting needs.

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AccountsIQ logo

Cloud-based accounting software for medium-sized businesses

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AccountsIQ is cloud-based accounting software that assists businesses in construction, retail, hospitality, and other sectors with cash flow forecasting, budgeting, and financial reporting.

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ExpensePlus logo

Brilliant Fund Accounting Software for Charities

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ExpensePlus is a cloud-based fund accounting software meticulously designed for churches, charities, and community groups. It offers efficient expense management, donation tracking, and comprehensive financial reporting, tailored to simplify and enhance financial processes.

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Denali Fund logo

Nonprofit accounting software

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Denali FUND by Cougar Mountain Software is a cloud-based and on-premise accounting software designed specifically to help nonprofit organizations streamline & manage all accounting processes, including accounts payable & receivable, general ledger, bank reconciliation, payroll, and more

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MIP Accounting logo

Fund accounting for government organizations and nonprofits

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MIP Fund Accounting is a comprehensive, configurable fund accounting solution designed to meet and handle the complex financial management and fund accounting needs of nonprofit and government organizations.

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Fund EZ logo

Accounting Software Built for Your Nonprofit

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Empower your nonprofit with Fund EZ! Effortlessly create and track budgets for diverse funds, programs, projects, grants, funding sources, and departments. Achieve financial excellence with Fund EZ's all-in-one solution!

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DLS Financials logo

The premier savings and loan software for dioceses!

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The premier savings and loan software for diocese to manage deposits/loans/pooled investment management software for over 22 years!

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BUCS logo

Integrated software for the municipal sector.

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Fund accounting system designed to meet the needs of government, nonprofit and educational agencies.

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SylogistMission ERP logo

Fund accounting solution for non-profit organizations.

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Serenic Navigator for NPO is a cloud-based and on-premise fund accounting solution which helps non-profits manage resources, programs, and finances on a unified platform. It allows users to have complete visibility into the budgets and expenditures required to manage funding sources and programs. The software delivers several functions including donor management, payroll processing, human resources, budget tracking, grant management, encumbrance, and more.

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Adfinity logo

Accounting and financial management software

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Adfinity is one of the most complete accounting software packages, offering a large variety of advanced financial management features. Adfinity brings added value in reporting, automation, digitalization of workflows and paperless working.

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Sparkrock logo

Finance & Human Resources Software Suite.

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Sparkrock 365 is a SaaS based enterprise level software that has proven Workforce Management and Finance modules that streamline the operations for Not-for-profits, Health and Human Services, and K-12 & Educational Organizations.

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Aptean Industrial Manufacturing ERP Traverse Edition logo

Discrete manufacturer ERP with mobile access and automation

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Aptean Industrial Manufacturing ERP Traverse Edition is an ERP software tailored for discrete manufacturers. The solution is built on Microsoft technologies, providing businesses with a customizable platform that integrates with a variety of tools including Aptean Ship, Aptean Pay, and BI for real-time data analytics and decision-making.

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AFAS Software logo

Human resources, payroll, and finance management

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AFAS Software is a suite of tools that automates processes for human resources, payroll, & finance management, providing personalized access to the platform for both employees & managers. AFAS features include automated invoice reconciliation, leave and absence registration, payroll analysis & more.

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EBP Comptabilité logo

Accounting management software, available in two versions.

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ACTIV is a tool developed by EBP whose objective is to streamline the management of company accounting. The package is available in two versions: on the one hand, as a type of SaaS portal, or alternatively, as a tool which can be installed on a workstation under the Microsoft operating system.

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omniBooks logo

The all-in-one cloud financial and accounting software

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Powerful online accounting software for all your business finance management needs. Grow and track your business with omniBooks.

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Tangicloud logo

Nonprofit accounting software

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Tangicloud is a nonprofit accounting software that helps businesses manage accounts, invoices, and expenses. The platform enables managers to monitor and manage the financial health of businesses by providing real-time insights into account balances and transactions, as well as reporting tools.

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