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Top Rated Nonprofit Accounting Software with Financial Reporting in 2026

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Verified reviewer profile picture

All user reviews are verified by in-house moderators and provider data by our software research team.  Learn more

Last updated: February 2026

Financial reporting enables nonprofits to generate customized reports for different stakeholders, track financial performance, ensure transparency and accountability, and provide necessary documentation for board meetings, grant applications, and compliance requirements. Our reviewers in nonprofit accounting software rated this feature as highly important.

3 Best Nonprofit Accounting Software with Financial Reporting

  • QuickBooks Enterprise
  • QuickBooks Online Advanced - Highest rated for financial reporting
  • QuickBooks Online

See other top Nonprofit Accounting products with financial reporting

How we picked the 3 top rated products

We chose the high-performing solutions on this list based on verified user ratings on our site. Depending on available data, qualifying products either had to be among the most user-reviewed or the most searched-for products in the nonprofit accounting software category. They also needed to have sufficient reviews about financial reporting, have a minimum user rating of 3 out of 5 for that feature, and show evidence of U.S. market presence. We then added a distinction for the product with the highest rating for financial reporting based on our proprietary ratings and reviews. Sponsorship or client status has no influence on the selection of these products, but it may impact the order in which products appear.

Details for the 3 best products

QuickBooks Enterprise logo

QuickBooks Enterprise

4.5
(20.5K)
visit website

User insights about the financial reporting feature

Reviewers appreciate QuickBooks Enterprise's financial reporting capabilities for their ease of use, customization options, and comprehensive coverage of essential reports like P&L and Balance Sheets. They find it valuable for preparing detailed reports for taxes, budgeting, and decision-making. Users highlight the ability to generate and customize reports quickly, although some mention limitations in advanced reporting and customization. Integration with TurboTax and the ability to export data to Excel are also noted as beneficial aspects.
“What I like are it's financial reporting features which are highly valuable because they provide businesses with comprehensive, accurate, and actionable financial insights, enabling more informed and effective decision making.”
LS

Louisa S.

Manager

“QuickBooks Desktop offers highly customizable reporting features such as reporting by class. The reports play a critical role in analyzing our companies financials.”
SE

Susan E.

Staff Accountant

Nonprofit Accounting key features coverage

QuickBooks Enterprise offers 4 out of the 4 key features for Nonprofit Accounting software identified by reviewers:

Accounting4.6
General Ledger4.5
Income & Balance Sheet4.6
Bank Reconciliation4.5

Pros and cons based on 20,593 verified reviews

61% of users rated QuickBooks Enterprise 5 out of 5 stars, while 2% gave it 1 or 2 stars. To determine these pros and cons insights we analyzed 20,593 reviews and identified the topics where users expressed positive and negative sentiment.

Pros:

Comprehensive expense tracking

Ideal for small businesses

Effective financial management

Streamlined bookkeeping

Efficient tax management

Cons:

Frequent issue resolution challenges

Slow performance speed

Disruptive software updates

High cost concerns

Unreliable customer service

See pros and cons details

Pricing

Starting price:$2210 flat rate/per year|Free version:Not available|Free trial:Available

Prices may vary depending on the number of users and features.

QuickBooks Online Advanced logo
4.4
(1K)

User insights about the financial reporting feature

Users find QuickBooks Online Advanced's financial reporting tools robust and essential for decision-making. They appreciate the ease of generating and customizing reports, the ability to share access with accountants, and the versatility of the reporting features. Reviewers note the usefulness of reports for board meetings and tax preparation. However, some mention limitations in customization and the need for more graphic displays and charts. The Spreadsheet Sync feature is praised for its efficiency in data import and updates.
“Versatile reporting in Quickbooks Online Advanced allows the company to dynamically adjust financial reporting to suit the current needs of management.”
JB

Janice B.

CPA/Consultant

“All of my financial reports are accessible by my CPA. I easily added him to my QB account and he has his own access. ”
ST

Shannon T.

Owner operator

Nonprofit Accounting key features coverage

QuickBooks Online Advanced offers 4 out of the 4 key features for Nonprofit Accounting software identified by reviewers:

Accounting4.6
General Ledger4.4
Income & Balance Sheet4.6
Bank Reconciliation4.5

Pros and cons based on 1,035 verified reviews

60% of users rated QuickBooks Online Advanced 5 out of 5 stars, while 4% gave it 1 or 2 stars. To determine these pros and cons insights we analyzed 1,035 reviews and identified the topics where users expressed positive and negative sentiment.

Pros:

Convenient remote access

Efficient bookkeeping

Comprehensive tracking features

Robust financial management

Organized multi-entity management

Cons:

Challenging issue resolution

Limited desktop version compatibility

High costs and confusing pricing

Inconsistent customer service

Subpar mobile accessibility

See pros and cons details

Pricing

Starting price:$235 flat rate/per month|Free version:Not available|Free trial:Available

Prices may vary depending on the number of users and features.

QuickBooks Online logo
4.3
(8.3K)

User insights about the financial reporting feature

Reviewers highlight QuickBooks Online's financial reporting for its ease of use, customization options, and variety of available reports. They find it helpful for tax preparation, decision-making, and providing insights into financial health. Users appreciate the ability to generate reports quickly and share them with accountants. However, some mention difficulties with customization and occasional inaccuracies. The software's integration with other tools and the ability to export reports to Excel are also valued.
“The ability to run financial reports are a critical factor in accounting software when operating as a small business. When applying for loans, estimating taxes or just getting a good view of your profit/loss status I think QuickBooks Online makes this process fairly easy. ”
MS

Michelle S.

Small Business Owner/Brand Designer

“1.User friendly Financial reporting that enables user to choose the data field and information to be displayed. 2. Real time and transaction based reporting which provides instant report. ”
RM

R.K. M.

Head of Consulting

Nonprofit Accounting key features coverage

QuickBooks Online offers 4 out of the 4 key features for Nonprofit Accounting software identified by reviewers:

Accounting4.5
General Ledger4.4
Income & Balance Sheet4.5
Bank Reconciliation4.4

Pros and cons based on 8,328 verified reviews

57% of users rated QuickBooks Online 5 out of 5 stars, while 5% gave it 1 or 2 stars. To determine these pros and cons insights we analyzed 8,328 reviews and identified the topics where users expressed positive and negative sentiment.

Pros:

Cloud-based accessibility

Ideal for small businesses

Seamless integrations

Comprehensive accounting features

Efficient tax management

Cons:

Frequent bugs and crashes

Limited desktop features

Recurring costs and price increases

Inadequate customer support

Complicated transaction management

See pros and cons details

Pricing

Starting price:$38 flat rate/per month|Free version:Not available|Free trial:Available

Prices may vary depending on the number of users and features.

Other Top Rated Nonprofit Accounting Software with Financial Reporting in 2026

Blackbaud Financial Edge NXT logo

Blackbaud Financial Edge NXT

Cloud fund accounting software for social good organizations

visit website
Financial Edge NXT delivers comprehensive fund accounting tools that allow organizations to streamline financial processes and demonstrate accountability

Read more about Blackbaud Financial Edge NXT

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Endowment Manager logo

Endowment Manager

(0)

Replace your endowment accounting spreadsheets

visit website
Simplify endowment management while maintaining or advancing your organizations unique policies & procedures

Read more about Endowment Manager

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Fund EZ logo

Fund EZ

Accounting Software Built for Your Nonprofit

visit website
Empower your nonprofit with Fund EZ! Effortlessly create and track budgets for diverse funds, programs, projects, grants, funding sources, and departments. Achieve financial excellence with Fund EZ's all-in-one solution!

Read more about Fund EZ

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Aplos logo

Aplos

Category Leaders

Aplos: where every dollar finds its purpose

visit website
Aplos provides the robust accounting framework necessary to track restricted vs unrestricted funds and generate comprehensive, auditor-friendly reports. Our features are crafted to aid budgeting, automate complex allocations, and provide real-time insights into your financial health.

Read more about Aplos

Users also considered
Sage Intacct logo

Sage Intacct

Category Leaders

Best-in-class Cloud ERP for Finance

visit website
The #1 Nonprofit Cloud Accounting and Financial Management System Powering Mission-Driven Nonprofits. The AICPA’s preferred provider.

Read more about Sage Intacct

Users also considered
MIP Accounting logo

MIP Accounting

Fund accounting for government organizations and nonprofits

visit website
MIP Fund Accounting is a comprehensive, configurable fund accounting solution designed to meet and handle the complex financial management and fund accounting needs of nonprofit and government organizations.

Read more about MIP Accounting

Users also considered
QuickBooks Enterprise logo
Category Leaders

Enterprise accounting, FSM and inventory management solution

QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

Read more about QuickBooks Enterprise

Users also considered
QuickBooks Online logo
Category Leaders

Accounting and business management software

QuickBooks Online is an all-in-one online business software designed to help manage business finances. The platform is built to scale businesses, unlocking insights and providing the functionality of a larger team, all on one integrated platform.

Read more about QuickBooks Online

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QuickBooks Online Advanced logo
Category Leaders

Accounting & business management for small businesses

QuickBooks Online Advanced is a web-based accounting & business management solution which enables small businesses to track sales, inventory, financial accounts & payroll from a single dashboard

Read more about QuickBooks Online Advanced

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NetSuite logo
Category Leaders

AI-powered cloud-based business management suite

NetSuite's ERP provides one integrated, cloud solution to manage your entire organization and accelerate your mission. Gain efficiencies with a powerful nonprofit fiscal management system built to meet the unique needs of your nonprofit.

Read more about NetSuite

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Sage Accounting logo

Accounting software for small businesses

Sage Accounting is an accounting system for small business owners. It has features to help users forecast their cashflow, send and track invoices and act on real-time reporting. Users can manage their business from anywhere, at any time, from the cloud and with mobile functionality. Sage Accounting application is available for iOS and Android.

Read more about Sage Accounting

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MoneyMinder logo
Category Leaders

Simple accounting software for volunteers.

Simple nonprofit accounting software for volunteer-based groups (PTAs, PTOs, Booster Clubs, Sports Teams, Scouts, Service Clubs, etc.)

Read more about MoneyMinder

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MonkeyPod logo

Your all-in-one nonprofit management platform

MonkeyPod is an all-in-one platform to manage nonprofit accounting, donor management, grants management, CRM, email marketing, online fundraising, and more. Add unlimited users, CRM entities, email subscribers, online fundraising pages, pipelines, and more at no additional cost.

Read more about MonkeyPod

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Kashoo logo

Online accounting software for small businesses

Kashoo is simple cloud accounting for small business owners who want the control and simplicity of doing their own books. It provides small business owners with the ability to run their business the way they want to, with tools for invoice management, payment processing, reporting, and more.

Read more about Kashoo

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ZipBooks logo

Accounting and online invoicing software

ZipBooks is a cloud-based accounting software that caters to the bookkeeping and accounting needs of small to medium-sized businesses and bookkeeping firms. The solution offers core accounting, financial reporting, online invoicing, expense tracking, credit card processing, and more.

Read more about ZipBooks

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OneStream logo

Corporate performance management solution for enterprises

OneStream is a unified corporate performance management (CPM) solution which enables businesses to manage their financial reporting, budgeting & forecasting

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Multiview ERP logo

Enterprise resource planning (ERP) solution

Multiview is a highly-scalable modular ERP software for scaling organizations which require more automation, control and insight into their operations. A fully-integrated suite of financials ranges from core accounting, budgeting and forecasting to materials management and workflow approvals.

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iplicit logo

Cloud-based accounting and financial management software

iplicit is a cloud-based software designed for businesses of all sizes that helps streamline accounting processes, generate business reports, and analyze financial datasets on a unified platform. Key features include summary charts, multi-currency, and purchase orders.

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MYOB Business logo

Online accounting & payroll for every business

Small Business cloud based accounting software to automate payroll, manage financial performance, tax and all your accounting needs.

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AccountsIQ logo

Cloud-based accounting software for medium-sized businesses

AccountsIQ is cloud-based accounting software that assists businesses in construction, retail, hospitality, and other sectors with cash flow forecasting, budgeting, and financial reporting.

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Denali Fund logo

Nonprofit accounting software

Denali FUND by Cougar Mountain Software is a cloud-based and on-premise accounting software designed specifically to help nonprofit organizations streamline & manage all accounting processes, including accounts payable & receivable, general ledger, bank reconciliation, payroll, and more

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Limelight logo

Cloud FP&A software for growth driven finance

Limelight is cloud FP&A software for finance teams to drive growth, agility and critical business decisions. Hundreds
of North American CFOs use Limelight to uncover the insights and models that lead to successful business plans - and greater influence and respect for their finance function.

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Springly logo

All-in-one nonprofit software for day-to-day management

Springly, a brand of AssoConnect, is an all-in-one nonprofit management software. It helps organizations save time on daily management with features for fundraising, accounting, website building, emailing, and more. Rated 4.7/5 stars on Google, Springly has over 30,000 happy customers.

Read more about Springly

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AccuFund Accounting Suite logo

Online and Onsite Accounting Software for Nonprofits & Govt

AccuFund’s complete nonprofit financial management system improves all critical aspects of your nonprofit, from budget development to grants management to payroll and HR and accounts payable, selecting the modules that your nonprofit needs now and add others in the future as needs evolve.

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Clay logo

Software contable y financiero en Chile

Clay es el software contable y financiero en la Chile que conecta a contadores y dueños de negocio en un mismo lugar. Es el punto de encuentro donde ambos pueden trabajar con la misma información, siempre actualizada y respaldada desde sus fuentes de verdad: 14 bancos, SII y TGR.

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Key features for Nonprofit Accounting software

Based on GetApp's analysis of verified user reviews collected between July 2021 and August 2024.

  • Accounting: Reviewers value the detailed tracking of income and expenses, customizable reports, and the ability for non-accountants to use the software effectively. 100% of reviewers rated this feature as important or highly important.
  • General Ledger: Users appreciate the ease of tracking income and expenses, customizable chart of accounts, and the ability to generate accurate reports. 99% of reviewers rated this feature as important or highly important.
  • Income & Balance Sheet: Users emphasize the importance of transparency, easy customization of reports, and the ability to track financial standings for grant applications. 97% of reviewers rated this feature as important or highly important.
  • Bank Reconciliation: Reviewers mention the ease of linking to bank accounts, automatic matching of transactions, and the time-saving aspect of the reconciliation process. 95% of reviewers rated this feature as important or highly important.