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Top Rated Billing and Invoicing Software with Zendesk

Last updated: May 2026

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28 software options

Chargebee logo

Chargebee

Subscription management and recurring billing software

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Chargebee automates the entire billing process of your recurring customers with invoicing, dunning, metered billing, taxation, flexible price plans, and more.

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Rippling logo

Workforce management across HR, finance, and IT. 

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Rippling Spend: Consolidate your business’s corp cards, bill pay, travel and expense management, into one modern system with built-in approvals, custom policies, and automatic reconciliation.

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Flowlu logo

Work automation and team collaboration in one platform.

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Keep all financial records in one place with real-time insights and visual reports to track expenses and boost revenue. Create and send professional invoices in seconds, accept online payments, and automate billing to streamline cash flow. Stay organized, get paid faster, and impress your clients.

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TimeCamp logo

A 100% free time tracker for teams. Unlimited users for $0.

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TimeCamp is a time tracking platform with which SMBs can track billable hours, generate automatic invoices & manage employee time & attendance

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Avaza logo

All-in-one, client-focused project management for teams.

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Access multi-currency expense tracking, budgeting and billing all in one app with Avaza. Available in the cloud, from any device.

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OnPrintShop logo

#1 AI-Powered Web-to-Print Software

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#1 AI-powered Web-to-Print software to boost print sales, automate processes, and streamline print business operations.

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Axonaut logo

All-in-one business management for small teams.

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Create, send, and track professional invoices and quotes. Automate billing cycles and payment reminders to keep your cash flow healthy.

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Paycepaid logo

Debt Collection Software for Customer Centric Businesses

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Paycepaid is ideal for businesses that operate on credit terms and want to give their customers options to pay.

A solution that scales with your business as you grow from medium to enterprise!

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ChargeDesk logo

Payment management extension for the most popular apps

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Payment management extension for popular third-party applications featuring automatic billing, receipts, and invoicing

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Hubstaff logo

Centralized app for time tracking and productivity metrics

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Streamline your billing with Hubstaff: automate and track invoicing and billable hours seamlessly. Enhance your brand with customizable invoices. Easy integration with QuickBooks, PayPal, and more. No credit card needed, available for iOS and Android. Simplify billing in a few clicks.

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SalesBinder logo

Inventory management solution for SMBs

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SalesBinder is an inventory management platform that helps businesses manage stock, invoices, purchase orders, estimates, and more. It comes with an administrative dashboard, which enables users to monitor sales activities, monthly revenue, and account statistics via actionable analytics.

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RevCent logo

Subscription billing, trial offers and usage based billing

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RevCent is a cloud-based platform designed to manage products, transactions, subscription billing, usage based billing, shipping, and more. It enables professionals to filter and view the customer database and filter by specific campaigns, date range, status, products, metadata, and AdWords.

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Recurly logo

Recurly. Keep a good thing growing™️

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Automate invoice creation with precise tax calculations—wherever you do business. Streamline recurring billing across plan purchases, renewals, and adjustments using a variety of flexible billing options. Spend time and effort on your product and leave the billing lift to Recurly.

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Blue Note Systems logo

CRM software to manage leads, sales, quotes & campaigns

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Blue note systems, based on SugarCRM, is a cloud-based customer relationship management (CRM) software designed to help businesses handle the entire sales cycle, from prospecting to providing customer service. Features include multi-channel marketing, lead nurturing, real-time analytics, and more.

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Yanomo logo

Time tracking for SMBs: winning insights, gorgeous invoices!

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Beautiful, easy invoices, straight from the #1 time tracking app!

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Abowire logo

Abowire is an expert-driven solution to accelerate growth.

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Abowire is an expert-driven solution to automate and scale your recurring revenue & accelerate your growth.

Our commitment is to fast-track your journey to subscription success, providing unparalleled customization and support.

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Utilmate logo

Comprehensive utility billing solution

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Utilmate is a comprehensive utility billing solution that helps businesses streamline their invoicing and customer communication processes. It offers an all-in-one system for utility companies that serve multi-tenanted homes and businesses. The platform allows users to easily set up and manage billing operations, reducing time to market and improving efficiency.

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SubscriptionFlow logo

Subscription management software to manage plans & billing

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SubscriptionFlow is an automated and highly customizable subscription billing and payments management system that offers intelligent pricing and in-built CRM to help users manage it all in one place.

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Scoro logo

Manage projects, resources, and finances in a single system

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Cover any billing scenario and automate invoicing with Scoro. Create recurring invoices, bill for time spent and cost incurred, or issue invoices for fixed-fee projects. Sync with your finance tools for accurate payment information and speedy cash collection.

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PandaDoc logo

Cloud-based tool for creating, editing and signing documents

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Sales teams can collect payments directly inside their PandaDoc proposals, quotes and contracts as soon as the documents get eSigned. You can further integrate via Zapier with accounting and invoicing software like Freshbooks and Quickbooks online.

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Accelo logo

Transform the way you manage client work

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Easily bill clients and create invoices directly from projects, service issues, contracts, and timesheets. Accelo features automatic time capturing to record the time you spent on projects and tasks, eliminating the need to worry about untracked time, so you know exactly how much to bill clients.

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FreshBooks logo

Invoice and accounting software tailored to small businesses

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FreshBooks lets you create, send & track invoices, as well as create expenses, send late payment reminders and account statements, and set up recurring billing.

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Replicon Time Tracking logo

Cloud-based project time tracking platform

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Replicon Time is a leading cloud-based project time tracking platform that helps mid-market and enterprise organizations manage time, projects, and workforce operations with accuracy and confidence.

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QuickBooks Online Advanced logo

Accounting & business management for small businesses

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Automate billing and invoicing with customizable templates, batch processing, and real-time payment tracking for efficient operations.

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WorkflowMax logo

Xero owned financial project management software for SMBs

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Control every aspect of your invoice, from how it looks to what info gets displayed. With WorkflowMax, you can manage any job from leads through to invoicing.

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