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Payroll Software with Accounting Integration (2026)

Last updated: April 2026

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Key features of Payroll Software

Based on GetApp's analysis of verified user reviews collected between July 2021 and August 2024.

  • Payroll Management: Reviewers value the comprehensive management of payroll, taxes, and employee documents, highlighting the automation and ease of access to pay stubs and reports. 96% of reviewers rated this feature as important or highly important.
  • Direct Deposit: Users appreciate the convenience and reliability, noting it saves time, reduces errors, and allows employees to split deposits across multiple accounts. 96% of reviewers rated this feature as important or highly important.
  • Payroll Reporting: Reviewers highlight the detailed and customizable reporting capabilities, aiding financial analysis, compliance, and decision-making with comprehensive payroll data. 94% of reviewers rated this feature as important or highly important.
  • W-2 Preparation: Users find W-2 preparation efficient and straightforward, emphasizing automatic generation, distribution, and compliance with legal requirements. 93% of reviewers rated this feature as important or highly important.
  • Tax Compliance: Reviewers stress the importance of automated tax calculations and filings, which help avoid penalties and ensure compliance with federal and state regulations. 92% of reviewers rated this feature as important or highly important.
  • Employee Database: Users value the centralized storage of employee information, including personal details and performance data, enhancing HR management and record-keeping. 85% of reviewers rated this feature as important or highly important.
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111 software options

QuickBooks Enterprise logo

Enterprise accounting, FSM and inventory management solution

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QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

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Rippling logo
Category Leaders

Workforce management across HR, finance, and IT. 

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Rippling runs payroll in minutes with a 100% error-free guarantee, compliance automation, and configurability. No manual work needed.

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Patriot Payroll logo
Category Leaders

Cloud-based accounting and payroll software for businesses

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Basic Payroll: $17/month + $4 per employee or contractor. You run payroll and handle your tax filings.

Save your time and money with Patriot Software's online Basic Payroll. Run payroll in three simple steps. Free direct deposit, and employee portal.

Read more about Patriot Payroll

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Gusto logo

Gusto is the all-in-one HR platform for growing businesses.

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With Gusto, you get modern HR features like effortless payroll, benefits, hiring, management resources—and more. Gusto is proud to serve more than 400,000 businesses in the US with a single trusted system, competitive compensation tools, and expert guidance to help you empower your team.

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Vagaro logo

All-in-one software for beauty, wellness, & fitness pros

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Vagaro is all-in-one software for beauty, wellness, and fitness professionals. Manage appointments, accept payments, run marketing campaigns, and grow your business all from one easy-to-use platform designed to help you save time and boost revenue.

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FreshBooks logo

Invoice and accounting software tailored to small businesses

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FreshBooks is accounting software that helps small business perform accounting tasks, conduct invoicing, manage expenses, and more.

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Buddy Punch logo

Effortless Time Tracking, Scheduling & Payroll Management

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Buddy Punch accelerates payroll prep—capture employee hours accurately, enforce breaks and overtime rules, then export ready-to-use reports directly to QuickBooks, ADP, Paychex, and more for error-free payroll runs.

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Paycor logo

All-in-on HR solution built to modernize people management

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Paycor’s all-in-one, cloud-based human capital management (HCM) platform modernizes every aspect of people management, from recruiting, onboarding and payroll to career development and retention.

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7shifts logo

Employee engagement and scheduling solution

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Run payroll in minutes, not hours. 7shifts Payroll is automated, which means saved time from no manual entries. It's designed to address restaurant challenges like tips, labor, compliance, union fees & onboarding. Sync tip data directly to Payroll for automatic tax deductions & tip credit top-ups.

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Hubstaff logo

Centralized app for time tracking and productivity metrics

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Hubstaff's payroll tracking streamlines team payments with automatic processes and $0 fees. Integrates with accounting software for accurate bookkeeping. Customize pay rates and schedules, supporting multiple currencies for global teams. Offers detailed reports and GPS tracking.

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RUN Powered by ADP logo

Payroll, Tax Filing, HR and Timekeeping

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An intuitive interface makes paying your people easy and fast. In addition, AI-enabled tech streamlines your payroll and HR tasks, and flags time-consuming payroll mistakes before they happen.

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Wave logo

Accounting, invoicing, and payroll management platform

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Wave is an integrated solution designed for small businesses. With our automatic bank connections, information flows into Wave, without manual entry. Users can collaborate with accountants or bookkeepers in real-time.

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Paylocity logo

One unified platform for HR, Finance, and IT.

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Paylocity’s payroll software automates pay, catches errors, and streamlines tasks. Run payroll in minutes, ensure compliance, and integrate with benefits. Help employees get paid accurately and on time, with on-demand access to earned wages.

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OnTheClock logo

Cloud-based employee time clock and payroll application

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Our time clock offers built-in payroll as well as payroll integration with top payroll software providers such as Gusto, QuickBooks, Thomson Reuters, ADP, Paychex and more! Simply export your employee time card data for an easy and convenient payroll process for you and your accountant.

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NetSuite logo

AI-powered cloud-based business management suite

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NetSuite is an AI-powered cloud-based business management suite. It helps organizations streamline their operations and gain real-time insights into their performance. The suite caters to a range of industries such as manufacturing, retail, and professional services.

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Paycom logo
Category Leaders

The only HR and payroll software built on a single database

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Beti®, Paycom’s automated payroll experience, identifies errors and guides employees to fix them before submission. This results in improved accuracy, reduced employer liability and increased payroll oversight — all while giving employees greater paycheck confidence.

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Justworks logo
Category Leaders

Payroll, benefits, HR, and compliance all in one place.

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Justworks, the fastest growing HR technology company, simplifies the payroll process so entrepreneurs can easily pay their employees. Justworks features seamless automated payroll, one-off payments, W-2 generation, PTO tracking, and reporting — all in one system.

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Paychex Flex logo

A Simple Approach to HR, Payroll, and Benefits.

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Our payroll software helps calculate wages, manage deductions, and process payroll runs. We integrate payroll with time tracking, benefits, and HR systems to reduce errors and improve efficiency.

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OnPay logo
Category Leaders

Cloud-based payroll and HR software for businesses

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OnPay is an easy-to-use, cloud-based software for small and mid-sized businesses to simplify payroll, automate taxes, and manage HR backed by reliable, expert support.

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Square Payroll logo

Cloud-based payroll processing solution

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Square Payroll is a cloud-based U.S. solution that handles federal and state payroll taxes including withholdings, payments and filings

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APS Payroll logo

Your Workforce Partner

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APS delivers payroll services with full-service tax compliance and a unified HCM platform. Designed for small, midsize, and larger organizations, our cost-effective SaaS solution makes payroll processing simple, accurate, and stress-free.

Read more about APS Payroll

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Bright logo

Brilliant people use Bright software

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Bright offers a suite of industry-leading software solutions for accountants, bookkeepers and SMEs across the UK and Ireland.

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TriNet HR Plus logo

HR | Onboarding | Payroll | Benefits | Compliance

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“Three-click payroll” automatically syncs data across your platform, resulting in fewer data-entry errors and faster payroll processing.

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WebHR logo

Human resources and employee scheduling solution

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WebHR supports Payroll for countries US, UK, Australia, India, China, Malaysia, Singapore, Pakistan, KSA, U.A.E. Nigeria and many more countries

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Proliant logo

Discover the perfect balance of technology and service.

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Proliant is a cloud-based HR software for small and medium enterprises that offers payroll & HRIS, time & attendance, onboarding and benefits administration

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