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Top Rated Nonprofit Accounting Software with Fund accounting

Last updated: May 2026

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36 software options

Sage Intacct logo

Sage Intacct

Best-in-class Cloud ERP for Finance

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Sage Intacct is the AICPA-preferred cloud accounting solution for nonprofits. Automate fund accounting, grant tracking, and ASC 958 reporting. Gain real-time insights with a multi-dimensional GL, AI-powered workflows, and integrations for donor CRMs—purpose-built for mission-driven organizations.

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Aplos logo

Aplos

Aplos: where every dollar finds its purpose

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Aplos provides the robust accounting framework necessary to track restricted vs unrestricted funds and generate comprehensive, auditor-friendly reports. Our features are crafted to aid budgeting, automate complex allocations, and provide real-time insights into your financial health.

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Blackbaud Financial Edge NXT logo

Blackbaud Financial Edge NXT

Cloud fund accounting software for social good organizations

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Financial Edge NXT delivers comprehensive fund accounting tools that allow organizations to streamline financial processes and demonstrate accountability

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Fund EZ logo

Fund EZ

Accounting Software Built for Your Nonprofit

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Empower your nonprofit with Fund EZ! Effortlessly create and track budgets for diverse funds, programs, projects, grants, funding sources, and departments. Achieve financial excellence with Fund EZ's all-in-one solution!

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QuickBooks Enterprise logo

Enterprise accounting, FSM and inventory management solution

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QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

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MoneyMinder logo

Simple accounting software for volunteers.

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Simple nonprofit accounting software for volunteer-based groups (PTAs, PTOs, Booster Clubs, Sports Teams, Scouts, Service Clubs, etc.)

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MonkeyPod logo

Your all-in-one nonprofit management platform

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MonkeyPod is an all-in-one platform to manage nonprofit accounting, donor management, grants management, CRM, email marketing, online fundraising, and more. Add unlimited users, CRM entities, email subscribers, online fundraising pages, pipelines, and more at no additional cost.

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OneStream logo

Corporate performance management solution for enterprises

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OneStream is a unified corporate performance management (CPM) solution which enables businesses to manage their financial reporting, budgeting & forecasting

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ZipBooks logo

Accounting and online invoicing software

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ZipBooks is a cloud-based accounting software that caters to the bookkeeping and accounting needs of small to medium-sized businesses and bookkeeping firms. The solution offers core accounting, financial reporting, online invoicing, expense tracking, credit card processing, and more.

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My Member Software logo

Open-source membership management solution

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My Member Software is an open-source membership management solution designed to help associations, clubs, unions and foundations create and manage their own member administration portal. Primarily integrated with CMS Joomla, the solution can also be operated with Wordpress or Drupal websites.

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iplicit logo

Cloud-based accounting and financial management software

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iplicit is a cloud-based software designed for businesses of all sizes that helps streamline accounting processes, generate business reports, and analyze financial datasets on a unified platform. Key features include summary charts, multi-currency, and purchase orders.

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QuickBooks Online Advanced logo

Accounting & business management for small businesses

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QuickBooks Online Advanced is a web-based accounting & business management solution which enables small businesses to track sales, inventory, financial accounts & payroll from a single dashboard

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Limelight logo

FP&A, Without the Wait

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Limelight is a modern FP&A platform that automates budgeting, forecasting, and financial reporting with AI and narrative reporting for mid-market finance teams.

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Clay logo

Financial and accounting automation platform

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Clay is a financial and accounting software platform that helps businesses automate bank reconciliations, generate financial reports, and centralize business information. The platform features automatic bank reconciliation, cash flow projections up to twelve months, client and vendor management, and automated accounting entries. It includes integrations with multiple banks, tax authorities, and ERP systems, along with an AI assistant for user support.

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AccountsIQ logo

Cloud-based accounting software for medium-sized businesses

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AccountsIQ is cloud-based accounting software that assists businesses in construction, retail, hospitality, and other sectors with cash flow forecasting, budgeting, and financial reporting.

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Impactfully logo

Innovative cloud tools for philanthropy.

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Foundation Source empowers people and companies to create a better world through philanthropy. They make giving easier for more than 2,000 private foundations with innovative technology backed by philanthropic expertise.

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NonProfitPlus logo

Software for nonprofit organizations, management of grants

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Native Grant Management software; Track Grants from award to expiration. Flexible reimbursement process with revenue recognition. Budget checking to protect from overspending with many Inquiries. Beneficial for nonprofits looking for Nonprofit accounting software starting @ 725.00 per month.

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omniBooks logo

The all-in-one cloud financial and accounting software

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Powerful online accounting software for all your business finance management needs. Grow and track your business with omniBooks.

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Springly logo

All-in-one nonprofit software for day-to-day management

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Springly, a brand of AssoConnect, is an all-in-one nonprofit management software. It helps organizations save time on daily management with features for fundraising, accounting, website building, emailing, and more. Rated 4.7/5 stars on Google, Springly has over 30,000 happy customers.

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Tangicloud logo

Nonprofit accounting software

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Tangicloud is a nonprofit accounting software that helps businesses manage accounts, invoices, and expenses. The platform enables managers to monitor and manage the financial health of businesses by providing real-time insights into account balances and transactions, as well as reporting tools.

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Xledger logo

Empower ambition with Xledger.

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Xledger is a true cloud finance management platform, founded in 2000, and trusted by 100,000+ users worldwide. It automates accounting, unifies multi-entity reporting, and delivers real time insights, helping organisations modernise finance and outperform traditional ERPs

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Sparkrock logo

Finance & Human Resources Software Suite.

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Sparkrock 365 is a cloud-based enterprise resource planning (ERP) software that’s designed specifically for the needs of Not-for-Profit organizations. Sparkrock 365 integrates finance, workforce management, payroll and employee scheduling.

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Adfinity logo

Accounting and financial management software

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Adfinity is one of the most complete accounting software packages, offering a large variety of advanced financial management features. Adfinity brings added value in reporting, automation, digitalization of workflows and paperless working.

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Infor SunSystems logo

Financial management software that can adapt to any market

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Infor SunSystems is designed to help businesses handle accounting management, including nominal ledger, payables, and receivable ledgers, cashbook, multi-currency, and multi-dimensional analysis from one single source.

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AccuFund Accounting Suite logo

Online and Onsite Accounting Software for Nonprofits & Govt

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AccuFund’s complete nonprofit financial management system improves all critical aspects of your nonprofit, from budget development to grants management to payroll and HR and accounts payable, selecting the modules that your nonprofit needs now and add others in the future as needs evolve.

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