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Top Rated Nonprofit Accounting Software with Fund accounting

Last updated: October 2026

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53 software options

Sage Intacct logo

Best-in-class Cloud ERP for Finance

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Sage Intacct is the AICPA-preferred cloud accounting solution for nonprofits. Automate fund accounting, grant tracking, and ASC 958 reporting. Gain real-time insights with a multi-dimensional GL, AI-powered workflows, and integrations for donor CRMs—purpose-built for mission-driven organizations.

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Blackbaud Financial Edge NXT logo

Cloud fund accounting software for social good organizations

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Financial Edge NXT delivers comprehensive fund accounting tools that allow organizations to streamline financial processes and demonstrate accountability

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MIP Accounting logo

Fund accounting for government organizations and nonprofits

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MIP Fund Accounting is a comprehensive, configurable fund accounting solution designed to meet and handle the complex financial management and fund accounting needs of nonprofit and government organizations.

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Fund EZ logo

Accounting Software Built for Your Nonprofit

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Empower your nonprofit with Fund EZ! Effortlessly create and track budgets for diverse funds, programs, projects, grants, funding sources, and departments. Achieve financial excellence with Fund EZ's all-in-one solution!

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ChurchTrac logo

Online church management software

ChurchTrac is a church management software with features for membership management, donation tracking, accounting, reporting and attendance management

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Chmeetings logo

Church management software

ChMeetings is an all-in-one Church Management Software trusted by 7,000+ churches. Manage members, events, giving, volunteers, child check-in, and more. Includes a member portal, branded mobile app, and built-in church accounting.

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MoneyMinder logo

Simple accounting software for volunteers.

Simple nonprofit accounting software for volunteer-based groups (PTAs, PTOs, Booster Clubs, Sports Teams, Scouts, Service Clubs, etc.)

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QuickBooks Enterprise logo

Enterprise accounting, FSM and inventory management solution

QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

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MonkeyPod logo

Your all-in-one nonprofit management platform

MonkeyPod is an all-in-one platform to manage nonprofit accounting, donor management, grants management, CRM, email marketing, online fundraising, and more. Add unlimited users, CRM entities, email subscribers, online fundraising pages, pipelines, and more at no additional cost.

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OneStream logo

Corporate performance management solution for enterprises

OneStream is a unified corporate performance management (CPM) solution which enables businesses to manage their financial reporting, budgeting & forecasting

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ExpensePlus logo

Brilliant Fund Accounting Software for Charities

ExpensePlus is a cloud-based fund accounting software meticulously designed for churches, charities, and community groups. It offers efficient expense management, donation tracking, and comprehensive financial reporting, tailored to simplify and enhance financial processes.

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ZipBooks logo

Accounting and online invoicing software

ZipBooks is a cloud-based accounting software that caters to the bookkeeping and accounting needs of small to medium-sized businesses and bookkeeping firms. The solution offers core accounting, financial reporting, online invoicing, expense tracking, credit card processing, and more.

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Gracely logo

Gracely streamlines church management for all sizes.

Gracely is a comprehensive church management software designed to enhance the efficiency, effectiveness, and security of churches, regardless of their size. It provides an extensive array of features to meet the needs of the church.

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My Member Software logo

Open-source membership management solution

My Member Software is an open-source membership management solution designed to help associations, clubs, unions and foundations create and manage their own member administration portal. Primarily integrated with CMS Joomla, the solution can also be operated with Wordpress or Drupal websites.

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iplicit logo

Cloud-based accounting and financial management software

iplicit is a cloud-based software designed for businesses of all sizes that helps streamline accounting processes, generate business reports, and analyze financial datasets on a unified platform. Key features include summary charts, multi-currency, and purchase orders.

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Icon Church Management logo

Church management software

IconCMO is a church management solution for ministries of all sizes. The cloud-based solution provides tools such as member management, visitor tracking, communications, donor management, fund accounting, child check-in, event registration, and more to help churches manage their operations online.

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DLS Financials logo

The premier savings and loan software for dioceses!

The premier savings and loan software for diocese to manage deposits/loans/pooled investment management software for over 22 years!

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ACCOUNTS logo

Simple. Powerful. Affordable

Easily do your church or charity's bookkeeping, including simple and automatic fund accounting, with the ACCOUNTS software program.

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AccountsIQ logo

Cloud-based accounting software for medium-sized businesses

AccountsIQ is cloud-based accounting software that assists businesses in construction, retail, hospitality, and other sectors with cash flow forecasting, budgeting, and financial reporting.

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Clay logo

Cloud-based GTM data enrichment platform for all sizes

Cloud-based GTM enrichment and workflow automation platform combining 200+ data providers for sales, marketing, and revenue operations.

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Impactfully logo

Innovative cloud tools for philanthropy.

Foundation Source empowers people and companies to create a better world through philanthropy. They make giving easier for more than 2,000 private foundations with innovative technology backed by philanthropic expertise.

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Grain Ledger logo

Fund-based accounting software for churches

Grain Ledger is a cloud-based accounting software designed specifically for churches and ministries. The platform features fund-based accounting that tracks donations, manages expenses, and generates GAAP-compliant financial reports. It integrates with church management systems and includes automated invoice processing, real-time budget tracking, and donor contribution monitoring.

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Diamant/4 logo

Accounting & controlling automation system

Diamant/4 is a comprehensive accounting and controlling software that manages finances and automates business processes for organizations with complex financial structures. The modular system builds upon a core financial accounting module with optional extensions for invoice management, asset accounting, reporting, and group accounting. Its flexible integration capabilities allow seamless connection with existing IT landscapes through standardized interfaces and APIs.

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Xledger logo

Empower ambition with Xledger.

Xledger is a true cloud finance management platform, founded in 2000, and trusted by 100,000+ users worldwide. It automates accounting, unifies multi-entity reporting, and delivers real time insights, helping organisations modernise finance and outperform traditional ERPs

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NonProfitPlus logo

Software for nonprofit organizations, management of grants

Native Grant Management software; Track Grants from award to expiration. Flexible reimbursement process with revenue recognition. Budget checking to protect from overspending with many Inquiries. Beneficial for nonprofits looking for Nonprofit accounting software starting @ 725.00 per month.

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