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Top Rated Nonprofit Accounting Software with Small business

Last updated: October 2026

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46 software options

Fund EZ logo

Accounting Software Built for Your Nonprofit

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Empower your nonprofit with Fund EZ! Effortlessly create and track budgets for diverse funds, programs, projects, grants, funding sources, and departments. Achieve financial excellence with Fund EZ's all-in-one solution!

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ChurchTrac logo

Online church management software

ChurchTrac is a church management software with features for membership management, donation tracking, accounting, reporting and attendance management

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Chmeetings logo

Church management software

ChMeetings is an all-in-one Church Management Software trusted by 7,000+ churches. Manage members, events, giving, volunteers, child check-in, and more. Includes a member portal, branded mobile app, and built-in church accounting.

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MoneyMinder logo

Simple accounting software for volunteers.

Simple nonprofit accounting software for volunteer-based groups (PTAs, PTOs, Booster Clubs, Sports Teams, Scouts, Service Clubs, etc.)

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QuickBooks Enterprise logo

Enterprise accounting, FSM and inventory management solution

QuickBooks Desktop Enterprise is an accounting software for small businesses which provides users with real-time access to customer, employee, and vendor information. The software includes tools for managing inventory, shipping, sales orders, pricing, tasks, invoicing, reporting, and more.

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MonkeyPod logo

Your all-in-one nonprofit management platform

MonkeyPod is an all-in-one platform to manage nonprofit accounting, donor management, grants management, CRM, email marketing, online fundraising, and more. Add unlimited users, CRM entities, email subscribers, online fundraising pages, pipelines, and more at no additional cost.

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ExpensePlus logo

Brilliant Fund Accounting Software for Charities

ExpensePlus is a cloud-based fund accounting software meticulously designed for churches, charities, and community groups. It offers efficient expense management, donation tracking, and comprehensive financial reporting, tailored to simplify and enhance financial processes.

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ZipBooks logo

Accounting and online invoicing software

ZipBooks is a cloud-based accounting software that caters to the bookkeeping and accounting needs of small to medium-sized businesses and bookkeeping firms. The solution offers core accounting, financial reporting, online invoicing, expense tracking, credit card processing, and more.

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Daxko Operations logo

Membership management software for non-profit organizations

Complete operations software for member-based nonprofits - integrating programs, billing, and check-ins in one secure system.

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IconCMO Fund Accounting logo

Simple, Powerful Accounting Software.

Icon Systems Accounting is software for managing funds. It is specifically tailored for churches, nonprofits, and small businesses, offering a wide range of features.

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Gracely logo

Gracely streamlines church management for all sizes.

Gracely is a comprehensive church management software designed to enhance the efficiency, effectiveness, and security of churches, regardless of their size. It provides an extensive array of features to meet the needs of the church.

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Icon Church Management logo

Church management software

IconCMO is a church management solution for ministries of all sizes. The cloud-based solution provides tools such as member management, visitor tracking, communications, donor management, fund accounting, child check-in, event registration, and more to help churches manage their operations online.

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DLS Financials logo

The premier savings and loan software for dioceses!

The premier savings and loan software for diocese to manage deposits/loans/pooled investment management software for over 22 years!

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ACCOUNTS logo

Simple. Powerful. Affordable

Easily do your church or charity's bookkeeping, including simple and automatic fund accounting, with the ACCOUNTS software program.

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Kashoo logo

Small business accounting made easy.

Kashoo is simple cloud accounting for small business owners who want the control and simplicity of doing their own books. It provides them with the ability to run their business the way they want to, with tools for invoice management, payment processing, reporting, and more.

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Yapla logo

All-in-one payment and management platform for NPOs.

Yapla allows businesses to manage member data, create events and start accepting donations and payments in 5 minutes. Designed by and for associations, Yapla is an all-in-one payment and management platform that gives you the time to accomplish your mission.

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Grant Manager logo

Accounting management software to manage transactions & data

Grant Manager is an accounting software, which helps organizations manage transactions, digital documents, and data entry, as well as analyze grants revenue and expenditure. Managers can gain real-time visibility into transfers, credit, and balances across individual grants or multiple accounts.

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Clay logo

Cloud-based GTM data enrichment platform for all sizes

Cloud-based GTM enrichment and workflow automation platform combining 200+ data providers for sales, marketing, and revenue operations.

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NextWare Pro logo

Non-profit management solution

NextWare Pro is a non-profit management solution that helps give users more time and resources to focus on their cause.

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Impactfully logo

Innovative cloud tools for philanthropy.

Foundation Source empowers people and companies to create a better world through philanthropy. They make giving easier for more than 2,000 private foundations with innovative technology backed by philanthropic expertise.

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Grain Ledger logo

Fund-based accounting software for churches

Grain Ledger is a cloud-based accounting software designed specifically for churches and ministries. The platform features fund-based accounting that tracks donations, manages expenses, and generates GAAP-compliant financial reports. It integrates with church management systems and includes automated invoice processing, real-time budget tracking, and donor contribution monitoring.

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Quantibly logo

Nonprofit software

Quantibly is a web-based software that helps businesses synthesize data from all aspects of nonprofit operations, including governance, finance, fundraising, sales, products and services, and partnerships, and connect them to impact benchmarks.

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B1 Unity logo

Reducing involuntary errors and allowing access to key infor

Reducing involuntary errors and allowing access to key information. With an intuitive interface that can soon become part of their working day-to-day, Solidarity Associations and Employee Cooperatives achieve integration in less time and with greater simplicity than ever before. This allows them to devote maximum attention to processes while saving time traveling and with the security that comes from a high-quality system

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omniBooks logo

The all-in-one cloud financial and accounting software

Powerful online accounting software for all your business finance management needs. Grow and track your business with omniBooks.

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TrulySmall Accounting logo

Small business accounting, simplified.

TrulySmall Accounting is the ideal accounting solution for sole proprietors and freelancers. Simple, automated, and zero bloat.

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