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Top Rated Accounting Software with Invoice Processing in 2026

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Verified reviewer profile picture

All user reviews are verified by in-house moderators and provider data by our software research team.  Learn more

Last updated: February 2026

Invoice processing in accounting software automates invoice creation, tracking, and payment reconciliation. It streamlines workflows for accounts receivable and payable, improves accuracy, reduces manual effort, and provides clear financial reporting and visibility. Our reviewers in accounting software rated this feature as highly important.

5 Best Accounting Software with Invoice Processing

Product
User rating
Starting price
NetSuite logo
4.2
(1.7K)
Empty state illustration for "No pricing info"

No pricing info

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Xero logo
4.4
(3.2K)
25
flat rate/per month
visit website
FreshBooks logo
4.5
(4.5K)
21
flat rate/per month
visit website
Wave logo
4.4
(1.7K)
19
flat rate/per month
QuickBooks Online logo
4.3
(8.3K)
38
flat rate/per month

See other top Accounting products with invoice processing

How we picked the 5 top rated products

We chose the high-performing solutions on this list based on verified user ratings on our site. Depending on available data, qualifying products either had to be among the most user-reviewed or the most searched-for products in the Accounting software category. They also needed to have sufficient reviews about invoice processing, have a minimum user rating of 3 out of 5 for that feature, and show evidence of U.S. market presence. We then added a distinction for up to three products based on our proprietary ratings and reviews: Highest rated, Highly rated for invoice processing, and Highly rated for free version. Sponsorship or client status has no influence on the selection of these products, but it may impact the order in which products appear.

Details for the 5 best products

NetSuite logo

NetSuite

Reviews Sentiment
 
 
 
1-2(92)
3-4(906)
5(793)
Key Features
Income & Balance Sheet4.4
Financial Reporting4.3

User insights about the invoice processing feature

Reviewers appreciate NetSuite's robust and efficient invoice processing capabilities. They highlight the streamlined workflow, accuracy, and integration with other systems like Salesforce. Users find the real-time visibility and management functionality valuable, though some mention the need for additional investments for sales tax solutions.
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“I like that NetSuite's Invoice Processing allows me to quickly and efficiently process invoices. It streamlines the process and helps to ensure accuracy by automatically capturing and verifying invoice data. ”
Verified reviewer profile picture

Vladimir N.

Blogger, Content Writing and Publisher

“Visibility and management functionality, our past system was an IBM AS400 system that did not allow for the same monitoring and visibility. It was also onsite, requiring VPN, and not in real time. The real time allocations and connections give full visibility and a greater control of our business. The ability to create invoices automatically allows for me to better allocate my employees to complete their daily tasks. With this, it is vital because now I can have my order management team working on quality control and changes rather than focus solely on creation and allocation of invoices. ”
JS

Joshua S.

Director of Information Systems

Starting price
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No pricing info

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Pros and Cons based on 1,791 verified reviews
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Cloud-based accessibility

Efficient inventory management

Flexible customization options

Customizable and informative dashboards

Convenient web access

Slow performance speed

Prohibitive pricing for small businesses

Challenging implementation process

Inadequate customer support

Inefficient sales management

See pros and cons details
Xero logo

Xero

Reviews Sentiment
 
 
 
1-2(157)
3-4(1,150)
5(1,943)
Key Features
Income & Balance Sheet4.6
Financial Reporting4.4

User insights about the invoice processing feature

Reviewers feel Xero's invoice processing is simple, efficient, and user-friendly. They appreciate the ability to customize layouts, process multiple invoices, and integrate with other systems like Buildxact. Users highlight the ease of tracking and reconciling payments, though some mention issues with the latest format and lack of flexibility in customization.

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“Xero makes it a lot easier to recognise and reconcile payments received or made. Since we use Buildxact as well, every single expense from each project generates a bill that gets reconciled once the payment is made and the same happens with the invoices sent.”
MM

Marcos M.

Manager

“Xero offers a range of features for invoice processing, which can help businesses streamline their accounts payable processes and reduce the time and effort required to manage invoices.”
MK

Mehdi K.

Mehdi

Starting price
25flat rate /
per month
visit website
Pros and Cons based on 3,250 verified reviews

Cloud accounting accessibility

Customizable dashboard

Effective bookkeeping tools

Accessible learning resources

User-friendly interface

Slow issue resolution

Poor customer support

Limited inventory management

Lack of live support

Underdeveloped mobile access

See pros and cons details
FreshBooks logo

FreshBooks

Reviews Sentiment
 
 
 
1-2(82)
3-4(1,765)
5(2,655)
Key Features
Income & Balance Sheet4.4
Financial Reporting4.5

User insights about the invoice processing feature

Reviewers indicate FreshBooks' invoice processing is fast, accurate, and user-friendly. They value the ability to track invoices, set up recurring payments, and send automated reminders. Users appreciate the customizable templates and the ease of processing invoices online. Some note that money transfer times to bank accounts can be slow.

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“FreshBooks makes invoice processing a breeze, with just a few clicks your customers receive their invoices. Generating invoices can be a time-consuming process, but with FreshBooks, it's a smooth and efficient process. With a user-friendly interface and a range of customizable templates, creating and sending invoices has never been easier. ”
SS

Swati S.

Freelancer

“There are many things I like about invoice processing in Freshbooks. First of all, it is very user-friendly and easy to navigate. The interface is clean and simple, and it is easy to find what you are looking for. Additionally, I like that you can easily track your invoices and see when they are due. This is a great feature for keeping on top of your finances. Finally, I appreciate that you can set up recurring payments for your clients, which makes it easy to get paid on time.”
GK

Geoffrey K.

manager

Starting price
21flat rate /
per month
visit website
Pros and Cons based on 4,502 verified reviews

Cloud accounting accessibility

Efficient invoicing capabilities

Tailored for small businesses

Minimal learning curve

Effective freelancer tools

Reliance on internet connection

Limited bank integration

High costs for larger teams

Frequent technical issues

See pros and cons details
Wave logo
Reviews Sentiment
 
 
 
1-2(108)
3-4(553)
5(1,049)
Key Features
Income & Balance Sheet4.5
Financial Reporting4.4

User insights about the invoice processing feature

Reviewers appreciate Wave's invoice processing capabilities, highlighting its ease of use, professional appearance, and the ability to customize and automate recurring invoices with reminders. They find it helpful for tracking payments and managing discounts. However, some users mention delays in ACH payments and difficulties with overpayments and reconciliation.
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“Invoices can be easily customized and you can create recurring invoices with automated reminders so that even if you do forget, the customer can be reminded to pay you. Now you can also add discounts on invoices and they are applied before taxes. ”
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Rose G.

Land surveyor

“I'm happy with how easy it is to create invoices and process the payments. All unpaid invoices are on one page and you can send reminders to the clients too. Partial payments can be processed and it gives you a clear indication of what is outstanding.”
DD

Dina D.

Business Owner

Starting price
19flat rate /
per month
Pros and Cons based on 1,710 verified reviews
Verified reviewer profile picture

Affordable for small businesses

Intuitive and modern interface

Excellent value for small businesses

Comprehensive invoicing features

Effective bookkeeping solution

Slow performance and load times

Ineffective email communication

Limited customer support options

Unresolved software issues

Challenging bank reconciliation

See pros and cons details
QuickBooks Online logo
Reviews Sentiment
 
 
 
1-2(454)
3-4(3,126)
5(4,748)
Key Features
Income & Balance Sheet4.5
Financial Reporting4.4

User insights about the invoice processing feature

Users report QuickBooks Online makes invoice processing straightforward and efficient, with easy creation, customization, and tracking of invoices. They value the integration with other software and the ability to send invoices directly. However, some users experience issues with reminders, processing times, and customer service.

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“QuickBooks invoicing makes billing and collecting payments efficient. The system is designed to alert managers when payments are received, still open, and overdue. This is helpful in analysis and following up with collections. ”
BT

Benita T.

Loan Counselor

“I like how Invoice Processing in QuickBooks Online streamlines my billing process, saving me time and effort. I can easily create and send customized invoices to customers, and track payments with ease. ”
km

kgomotso m.

Manager

Starting price
38flat rate /
per month
Pros and Cons based on 8,328 verified reviews

Cloud-based accessibility

Ideal for small businesses

Seamless integrations

Comprehensive accounting features

Efficient tax management

Frequent bugs and crashes

Limited desktop features

Recurring costs and price increases

Inadequate customer support

Complicated transaction management

See pros and cons details

Other Top Rated Accounting Software with Invoice Processing in 2026

Sage Intacct logo

Sage Intacct

Category Leaders

Best-in-class Cloud ERP for Finance

visit website
Sage Intacct’s core financials automate your most important processes, reduce your reliance on spreadsheets, and give you greater visibility into your business

Read more about Sage Intacct

Users also considered
Accounting Seed logo

Accounting Seed

Category Leaders

Accounting and analytics software built on Salesforce

visit website
Accounting Seed is cloud-based software built in Salesforce that gives you all the tools you need to seamlessly connect financial data company-wide. Learn more about our product at: https://www.accountingseed.com/product/.

Read more about Accounting Seed

Users also considered
Canopy logo

Canopy

Practice management software for accounting firms

visit website
Canopy is a cloud-based practice management solution for accounting professionals. Streamline your firm and create a connected client experience using our suite of features including workflow, document management, time and billing, payments, a CRM with a secure client portal.

Read more about Canopy

Users also considered
NetSuite logo

NetSuite

AI-powered cloud-based business management suite

visit website
NetSuite AI-powered accounting simplifies the process of recording transactions, managing AP and AR, and closing the books. NetSuite supports multiple currencies, languages, and compliance standards and ensures data is accessible securely worldwide.

Read more about NetSuite

Users also considered
Xero logo

Xero

Category Leaders

Cloud-based accounting software for small businesses

visit website
Xero is an award-winning online accounting software designed for small business owners and accountants, available on any computer or mobile device with an internet connection. Automate your invoicing and reporting, get a full picture of your business with up-to-date financial data, and much more.

Read more about Xero

Users also considered
Zoho Books logo

Zoho Books

Category Leaders

Online accounting software for businesses of all sizes

visit website
Zoho Books helps small businesses to manage all financial activity, from invoices and expenses, to sales and purchase orders, to taxes, reports, and bank feeds.

Read more about Zoho Books

Users also considered
DataSnipper logo

DataSnipper

Intelligent automation platform for financial control

visit website
DataSnipper is a cloud-based intelligent automation platform designed for audit and finance teams that helps streamline workflows and offers features such as data collection, extraction, matching, and analysis.

Read more about DataSnipper

Users also considered
FreshBooks logo

FreshBooks

Category Leaders

Invoice and accounting software tailored to small businesses

visit website
FreshBooks automates daily accounting activities namely invoice creation, payment acceptance, expenses tracking, billable time tracking and financial reporting.

Read more about FreshBooks

Users also considered
Actionstep Legal Accounting logo

Actionstep Legal Accounting

Cloud-based accounting and billing for law firms

visit website
Soluno is a cloud-based accounting and billing software designed to accelerate law firms. With a full, easy-to-use suite of time/expense entry, billing, accounting, trust, and reporting features, law firms get everything they need to master their business.

Read more about Actionstep Legal Accounting

Users also considered
CosmoLex logo

CosmoLex

Web-based legal practice management & accounting software

visit website
CosmoLex handles the unique, legal accounting requirements lawyers face daily. Anytime/anywhere web access makes it easy to keep your books compliant & current.

Read more about CosmoLex

Users also considered
MIP Accounting logo

MIP Accounting

Fund accounting for government organizations and nonprofits

visit website
MIP Fund Accounting is a comprehensive, configurable fund accounting solution. With its end-to-end suite of functionality and multi-segmented chart of accounts MIP is designed to meet and handle the complex financial management and fund accounting needs of nonprofit and government organizations.

Read more about MIP Accounting

Users also considered
ZarMoney logo

ZarMoney

Category Leaders

Cloud-based accounting solution for businesses of all sizes

visit website
ZarMoney is a cloud-based accounting solution designed to assist businesses of all sizes with the management of inventory and finances. Key features include team collaboration, quote generation, invoicing, transaction tracking, remote access, and approval workflows.

Read more about ZarMoney

Users also considered
Eleven logo

Eleven

Cloud accounting software tailored for accounting firms

visit website
Eleven is a cloud accounting app that helps small and medium-sized accounting firms to streamline and scale their practice. You can automate bookkeeping for every client without falling back on Excel.

Read more about Eleven

Users also considered
Order.co logo

Order.co

Simplify every aspect of buying for your business

visit website
Order.co simplifies buying for businesses. Eliminate manual purchasing & payment tasks to create one place to purchase, approve, and pay for the products your business needs.

Read more about Order.co

Users also considered
Acumatica Cloud ERP logo

Acumatica Cloud ERP

Cloud-based enterprise resource planning software

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Acumatica simplifies accounting with tools for Accounts Payable, Receivable, Billing & Invoicing, and Bank Reconciliation. It streamlines Expense Tracking, Payroll Management, and Financial Reporting, while managing your General Ledger and Income & Balance Sheet effortlessly.

Read more about Acumatica Cloud ERP

Users also considered
TaxDome logo

Tax practice management software for bookkeepers and CPAs

TaxDome is a leading practice management platform for tax, bookkeeping and accounting firms, as well as CPAs and EAs. TaxDome allows firms of all sizes to streamline and maintain oversight of their practice by using one platform for both internal practice management and client-facing tools.

Read more about TaxDome

Users also considered
QuickBooks Online logo

Accounting and business management software

QuickBooks Online offers accounting with financial dashboards, invoice creation, online payment acceptance, expenses tracking, payroll & more.

Read more about QuickBooks Online

Users also considered
DealerCenter logo

Dealer management software for independent auto dealerships

DealerCenter is a dealer management system for independent car sales, with mobilized features for inventory tracking, desking, lending and document management

Read more about DealerCenter

Users also considered
QuickBooks Desktop logo

Comprehensive business management solution

QuickBooks Desktop provides a comprehensive business management solution that integrates accounting, payroll, inventory, and multiple company management functionalities. The software offers industry-specific editions tailored for manufacturing, wholesale, contractors, and accountants, with features like advanced reporting, job costing, and automated pricing rules. Users can enhance their experience with cloud hosting capabilities that enable remote access and team collaboration.

Read more about QuickBooks Desktop

Users also considered
SAP Concur logo

Travel, expense and invoice, automated and in control

SAP Concur is a leading cloud-based spend management solution that helps small, medium, and large businesses automate and simplify expense reporting, travel booking, and invoice processing. It’s designed to give organizations better control over their business spend by integrating near real-time data and using AI to audit 100% of transactions.

Read more about SAP Concur

Users also considered
Wave logo
Category Leaders

Accounting, invoicing, and payroll management platform

Why is Wave the world's fastest-growing accounting software for small businesses? It's easy, fast, 100% free, and made for owner-operated businesses.

Read more about Wave

Users also considered
Zoho Invoice logo

Online invoicing tool for freelancers and SMBs.

Zoho Invoice is an online invoicing software for freelancers and small to medium enterprises (SMEs). It helps you craft professional invoices, send payment reminders, and get paid faster online.

Read more about Zoho Invoice

Users also considered
Abby logo

Billing and invoicing platform

Abby helps businesses ensure that customer documents are legal and comply with the rules. Customers can pay online and receive reminders for late payments.

Read more about Abby

Users also considered
QuickBooks Online Advanced logo

Accounting & business management for small businesses

Advanced accounting software for streamlined financial management, automation, and enhanced reporting for growing businesses.

Read more about QuickBooks Online Advanced

Users also considered
Stampli logo

Stress-free finance operations

Stampli's AP automation solution, made for Accounting teams, centers on the AP process to drive efficiency across the procure-to-pay lifecycle — including payments, credit cards, vendor engagement and more.

Read more about Stampli

Users also considered

Key features for Accounting software

Based on GetApp's analysis of verified user reviews collected between July 2021 and August 2024.

  • Income & Balance Sheet: Reviewers appreciate the accurate financial insights, customizable reporting, and real-time data for effective business management and informed decision-making. 96% of reviewers rated this feature as important or highly important.
  • Financial Reporting: Users highlight the ability to generate customizable, comprehensive reports that offer valuable insights for decision-making, budgeting, and financial analysis. 94% of reviewers rated this feature as important or highly important.
  • General Ledger: Reviewers value the comprehensive tracking of transactions, real-time updates, and the ability to generate detailed financial statements for informed decision-making. 92% of reviewers rated this feature as important or highly important.
  • Billing & Invoicing: Users find the automated and customizable invoicing features efficient and appreciate the ability to track payments, set recurring invoices, and improve cash flow. 91% of reviewers rated this feature as important or highly important.
  • Bank Reconciliation: Reviewers mention the ease of reconciling bank accounts with automated syncing, real-time updates, and the ability to identify discrepancies quickly. 90% of reviewers rated this feature as important or highly important.
  • Expense Tracking: Users appreciate the ability to categorize expenses, upload receipts, and generate reports, which aids in budgeting, tax preparation, and financial control. 90% of reviewers rated this feature as important or highly important.