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Top Rated Direct Deposit Payroll Software with Non profits - Page 4

Last updated: May 2026

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145 software options

Compensation Strategy and Design logo

Meet employee expectations and evolving business needs.

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WTW Compensation Strategy and Design is a compensation management solution, which provides features such as incentive management, organizational charting, compensation plan modeling, salary planning, compensation statements, and employee recognition program management.

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PeopleStrategy logo

Modular Enterprise Human Capital Management solution

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PeopleStrategy provides you with the ability to attract, hire, and engage with your most valuable asset, your people. Our solution equips your leadership with the ability to simplify human resources processes, payroll service, and benefits administration with Broker services.

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ADP SmartCompliance logo

HCM, compliance, and payroll solutions

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ADP SmartCompliance is a cloud-based HCM compliance portfolio that is as an extension of your current payroll or other business planning technology. SmartCompliance aims to help you reduce the regulatory compliance burden for your organization, with a combination of technology and service.

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NEOGOV logo

Cloud-based human resources management platform

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NEOGOV provides an integrated HR platform specifically designed for public sector agencies. The system streamlines recruitment, onboarding, performance management, and policy administration through a customizable interface built on government best practices. NEOGOV's comprehensive suite supports the entire employee lifecycle while addressing common challenges faced by government HR professionals, including compliance requirements and document management.

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peopleHum logo

Medium and Large businesses that want to automate people man

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Enhance your employee experience & core HR functions + eSign with our global award-winning Ai-driven cloud HCM platform.

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IRIS Cascade logo

Simplifies HR admin and compliance in a single system.

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IRIS Cascade HR is an intuitive HR and payroll management system software helps you to manage the whole employee lifecycle.

Configurable and completely scalable, Cascade offers a suite of modules from recruitment, payroll, timesheets, training and development and more.

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Papershift logo

Employee scheduling & time tracking software

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Papershift is an employee scheduling and time tracking software which enables users to plan, manage and automate shift and roster schedules and projects, as well as plan resources and manage absences online via any internet-enabled device. Papershift supports native iOS and Android mobile apps.

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PDS Vista logo

HCM built for you

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Time Collection, Calendars and Auto-pay Generation, U.S. federal, state and local tax reporting, Canadian federal and provincial reporting, Job cost accounting, On-demand check calculator, Retroactive processing,
Leave time accrual, Effective-dated tax processing, Tax maintenance service, and more.

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Time Clock Wizard logo

Employee scheduling and time clock solution

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Time Clock Wizard is a comprehensive employee scheduling solution that provides businesses with a set of tools to streamline day-to-day operations. The platform offers a free online time clock that helps teams track employee work hours, absences, and late clock-ins, ensuring precise timekeeping and payroll reporting.

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Plaid logo

Platform that enables apps to connect with bank accounts

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Plaid is a technology platform which allows users to create connections between applications and bank accounts to authenticate accounts, check balances in real time, verify identities, validate income, pull transaction data, and verify borrower assets

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WorkforceHub logo

Time and attendance tracking for on-site and remote teams

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WorkforceHub from SwipeClock provides multi-location businesses of any size with timekeeping and attendance tracking for on-site and remote employees. Features include timesheets, webclock, compliance management, mobile application, complete timecard history, geofencing, custom fields, and more.

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ELMO Software logo

HR & Payroll Software, simplified.

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ELMO Software is a cloud-based solution that helps thousands of organisations across Australia, New Zealand and the United Kingdom to effectively manage their people, process and pay.

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Auris logo

Payroll & HR Solutions That Get it Right

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Auris is payroll software that offers secure processing, HR administration, and tax compliance for small and medium-sized businesses.

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Planday logo

Employee scheduling, time tracking & absence management

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Planday is the best way for shift-based businesses to manage employee scheduling, communication, time clocking and payroll all in one online system.

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ClockOn logo

HRIS for SMB's to schedule, track, pay and manage HR

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Rostering, Attendance and Payroll system that can be used as a very powerful combination or modules can be sold individually. It comes with a free mobile app, ClockOn Go, which can be used for scheduling, attendance tracking, sending payslips, communicating with employees and more.

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Payfit logo

Integrated payroll and HR management software for SMEs.

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PayFit helps over 4,000 companies easily manage and scale their payroll & HR processes, combining the best of both worlds; an automated payroll software along with personalised support from payroll experts, ensuring that you end up saving time by eliminating manual processes and avoiding mistakes.

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eNETEmployer logo

A Complete Online Payroll & HR Solution

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eNETEmployer is a cloud-based proven application that alleviates users' concerns about software backups and updates as they are performed automatically. Users have the convenience of calculating their payroll at a time that's convenient to them.

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Papaya Global logo

Global payroll and payments platform for businesses

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Papaya Global is a unified platform for global payroll and payments, enabling businesses to manage their international workforce operations. It integrates workforce management tools with payment processing technology to streamline hiring, compliance, and payroll functions for global teams.

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CheckMark Payroll logo

Desktop payroll software for Mac and Windows.

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CheckMark Payroll Software is a simple and easy-to-use desktop solution for processing payrolls, paying employees on time, and filing W2s with the SSA and most states. Compatible with the latest versions of Windows and macOS, CheckMark Payroll Software is ideal for small businesses, HR managers, accountants, and CPAs.

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Sage People logo

Enabling HR to build a high-performing global workforce.

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Sage People empowers HR to build a high-performing, global workforce that can handle future changes and stay ahead of the competition. Align talent with business strategy & deliver great workforce experiences that support a diverse culture through enterprise-grade, highly configurable HR technology.

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EPAY HCM logo

Human capital management for employers of hourly workforces

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EPAY is an online human capital management system (HCM) designed to support business HR with features across recruitment, onboarding, time tracking and more

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iTrent logo

Make the complex simple.

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iTrent from MHR is an award-winning integrated HR and Payroll solution.

The software is modular and highly customisable and includes HR, payroll, workforce and talent management, learning, recruitment, analytics, and employee engagement.

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Workday HCM logo

Human capital management system

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Workday HCM is an HR solution that helps organizations manage the global workforce. The system supports companies of all sizes, enabling organizations to comply with local regulations. Workday HCM features embedded AI insights that give organizations an understanding of the workforce. Using machine learning, the software enables teams to analyze employee data to deliver personalized recommendations, helping HR teams make informed decisions about people.

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Employment Hero logo

All-in-one HR payroll and recruitment platform

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Employment Hero is an integrated platform that combines human resources, payroll, recruitment, and employee benefits management into a single system. The software includes AI-powered candidate screening, applicant tracking, automated onboarding, time and attendance tracking, and leave management capabilities. It offers Single Touch Payroll reporting, award interpretation for compliance, and managed payroll services that handle calculations and submissions automatically.

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Zoho People logo

Human resources and learning management system

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Zoho People integrates with Zoho Payroll, GreytHR, and Paybooks to streamline your payroll processing and management.

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