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Top Rated Medical Billing Software with HIPAA Compliant in 2026

Verified reviewer profile picture
Verified reviewer profile picture

All user reviews are verified by in-house moderators and provider data by our software research team.  Learn more

Last updated: March 2026

HIPAA compliance ensures the protection and privacy of patient health information, safeguarding against breaches and unauthorized access. It is legally required and essential for secure patient data management and maintaining trust in medical practices. Our reviewers in medical billing software rated this feature as highly important.

6 Best Medical Billing Software with HIPAA Compliant

Product
User rating
Starting price
RXNT logo
4.3
(495)
319
per user/per month
visit website
SimplePractice logo
4.6
(2.8K)
49
flat rate/per month
visit website
TherapyNotes, LLC logo
4.7
(952)
59
per user/per month
visit website
Tebra logo
3.9
(1.3K)
Empty state illustration for "No pricing info"

No pricing info

visit website
TheraNest logo
4.4
(1K)
29
per user/per month
visit website
athenaOne logo
3.8
(904)
Empty state illustration for "No pricing info"

No pricing info

See other top Medical Billing products with hipaa compliant

How we picked the 6 top rated products

We chose the high-performing solutions on this list based on verified user ratings on our site. Depending on available data, qualifying products either had to be among the most user-reviewed or the most searched-for products in the Medical Billing software category. They also needed to have sufficient reviews about hipaa compliant, have a minimum user rating of 3 out of 5 for that feature, and show evidence of U.S. market presence. We then added a distinction for up to three products based on our proprietary ratings and reviews: Highest rated, Highly rated for hipaa compliant, and Highly rated for free version. Sponsorship or client status has no influence on the selection of these products, but it may impact the order in which products appear.

Details for the 6 best products

RXNT logo

RXNT

Reviews Sentiment
 
 
 
1-2(35)
3-4(178)
5(282)
Key Features
Billing & Invoicing3.9
Charting4.1

User insights about the hipaa compliant feature

Reviewers indicate that RXNT is highly HIPAA compliant, ensuring patient privacy and data security. They report that the software's encryption and two-factor authentication features are valuable for protecting patient records. Users feel confident in the confidentiality and safety of their information, which is crucial for their medical practices and regulatory compliance.

See related user reviews

“Everything is HIPAA compliant with the cloud based software, including having 2FA for additional security.”
CD

Chris D.

Owner

“Patient information is protected which is vital to our services especially as RXNT coordinates with our EMR”
EF

ELyse F.

Executive Director

Starting price
319per user /
per month
visit website
Pros and Cons based on 495 verified reviews

Efficient template design

Streamlined e-prescribing process

Issues with patient information management

See pros and cons details
SimplePractice logo

SimplePractice

Reviews Sentiment
 
 
 
1-2(63)
3-4(902)
5(1,849)
Key Features
Billing & Invoicing4.4
Charting4.3

User insights about the hipaa compliant feature

Reviewers appreciate SimplePractice's HIPAA compliance, which ensures the security and confidentiality of patient information. They value the software's secure templates and privacy features. Users feel confident in the protection of their documents and appreciate the peace of mind provided by the platform's adherence to HIPAA regulations.

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“I love knowing that any information that is in SimplePractice is safe and secure. It also helps me to know that I can put other information or documents in a compliant location.”
HP

Hannah P.

LCSW

“The HIPAA compliance aspect of this program was exactly what it needed to be. All information was secure and protected with the EHR platform from patient to provider.”
EM

Erica M.

Client Care Coordinator

Starting price
49flat rate /
per month
visit website
Pros and Cons based on 2,814 verified reviews

Comprehensive practice management

Intuitive user interface

Helpful video tutorials

Effective client reminders

Efficient clinician management

Lack of phone support

Inefficient email support

Complicated claims submission

Limited treatment planning features

See pros and cons details
TherapyNotes, LLC logo

TherapyNotes, LLC

Reviews Sentiment
 
 
 
1-2(26)
3-4(182)
5(744)
Key Features
Billing & Invoicing4.4
Charting4.7

User insights about the hipaa compliant feature

Users report that TherapyNotes, LLC adheres closely to HIPAA protocols, providing a secure environment for client information. They value the two-factor authentication and customizable HIPAA forms. Reviewers feel confident in the protection of their electronic records and appreciate the system's built-in compliance for privacy and confidentiality.
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“My clients have their information stored safely and are also able to access the portal for messages with HIPPA Compliant software. This puts my mind at ease. ”
SR

Shanel R.

Licensed Professional Counselor

“TherapyNotes has two-factor authentication available, and the administrator can determine who must have this feature.”
Verified reviewer profile picture

Robin M.

Clinical Associate

Starting price
59per user /
per month
visit website
Pros and Cons based on 952 verified reviews
Verified reviewer profile picture

Comprehensive support services

Highly responsive support

Outstanding customer service

Challenges with issue resolution

Complex insurance billing

See pros and cons details
Tebra logo

Tebra

Reviews Sentiment
 
 
 
1-2(239)
3-4(399)
5(718)
Key Features
Billing & Invoicing3.8
Charting3.7

User insights about the hipaa compliant feature

Reviewers report that Tebra is HIPAA compliant, which is crucial for protecting patient information. They appreciate the software's privacy features and the security of patient records. However, some users express concerns about non-compliant messaging systems and access issues. Overall, users find Tebra valuable for maintaining HIPAA compliance in their practices.

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“Compliance is make it or break it. Not having to worry about it with this tool means we can focus on actually helping patients.”
HW

Hannah W.

Manager

“It provides security for confidential patient information ”
RS

Robert S.

Manager Of DDP Clinics, Director of Billing

Starting price
Empty state illustration for "No pricing info"

No pricing info

visit website
Pros and Cons based on 1,356 verified reviews

User-friendly navigation

Comprehensive training resources

Effective practice management

Smooth integration process

Challenging contract management

Inefficient call support

Slow issue resolution

Unreliable email support

Negative financial impact

See pros and cons details
TheraNest logo

TheraNest

Reviews Sentiment
 
 
 
1-2(49)
3-4(391)
5(587)
Key Features
Billing & Invoicing4.3
Charting4.5

User insights about the hipaa compliant feature

Reviewers appreciate TheraNest's HIPAA compliance, which ensures the security and privacy of clinical information. They find the telehealth services and calendar preferences for client initials helpful for maintaining confidentiality. Users trust TheraNest for protecting patient data, which is essential for ethical and legal standards in mental health services.

See related user reviews

“Recording mental status and risk assessment is crucial to every appointment to comply with HIPPA. The easy access to motoring this requirement is an added plus.”
PH

Paul H.

Case Manager

“Knowing that we are following protocols with this system that is HIPAA compliant for mental health services is truly a plus.”
LA

Lorie A.

Office Manager

Starting price
29per user /
per month
visit website
Pros and Cons based on 1,027 verified reviews

Incorporates user feedback

Continuous updates and growth

Reliable staff assistance

Intuitive and user-friendly

Quick and helpful support

Frequent technical issues

Limited form customization

Complex insurance billing

Inefficient communication channels

Inadequate appointment management

See pros and cons details
athenaOne logo
Reviews Sentiment
 
 
 
1-2(163)
3-4(360)
5(381)
Key Features
Billing & Invoicing4.1
Charting4.2

User insights about the hipaa compliant feature

Reviewers indicate that athenaOne is HIPAA compliant, ensuring the protection and confidentiality of patient information. They appreciate the system's security measures, including verification processes and adherence to HIPAA guidelines. Users find the software easy to use and trust it for maintaining the privacy of their medical records.
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See related user reviews

“In the healthcare field, HIPAA compliance is crucial. athenaOne utilizes a DOB/SSN/Name system to ensure that you are accessing the correct information, every time.”
HR

Hannah R.

Billing Specialist

“It is HIPAA compliant. Data are secured and follow HIPAA guidelines.”
Verified reviewer profile picture

Evelyn G.

Virtual Administrative Medical Assistant

Starting price
Empty state illustration for "No pricing info"

No pricing info

Pros and Cons based on 904 verified reviews
Verified reviewer profile picture

Ease of learning

Template customization

Comprehensive EHR features

Excessive click navigation

Inconsistent account management

Problematic claim management

High costs and fees

Slow issue resolution

See pros and cons details

Other Top Rated Medical Billing Software with HIPAA Compliant in 2026

PracticeSuite logo

PracticeSuite

Cloud-based Medical Billing & Practice Management platform

visit website
PracticeSuite is a cloud-based medical billing platform that is built for both physician practices and billing companies. Features include scheduling, RCM, and financial reports. We also offer single sign-on to access multiple accounts, enterprise claims management, and collection management tools.

Read more about PracticeSuite

Users also considered
Waystar logo

Waystar

Improve your revenue cycle management

visit website
Waystar provides a next-generation, cloud-based technology platform that modernizes the healthcare revenue cycle. Our technology, data and client support work together to eliminate friction in payment processes, streamline workflows and improve financials for providers in every care setting.

Read more about Waystar

Users also considered
Advanced Data Systems logo

Advanced Data Systems

AI-enabled healthcare software for medical practices

visit website
Advanced Data Systems provides comprehensive healthcare software solutions including Practice Management, Electronic Health Records, and Radiology Information Systems. The ONC-certified platform features AI-driven tools like MedicsScribeAI for voice-to-text documentation and integrates scheduling, billing, and clinical documentation functionalities. The system serves multiple medical specialties with customizable workflows designed to enhance operational efficiency.

Read more about Advanced Data Systems

Users also considered
ModMed logo

ModMed

Specialty healthcare software for medical practices

visit website
ModMed® BOOST RCM combines certified specialty coders with AI-driven insights to help streamline billing, reduce denials and accelerate reimbursements. Integrated with EMA®, BOOST keeps revenue cycles healthy while freeing staff to focus on patient care

Read more about ModMed

Users also considered
Mercury One Plus logo

Mercury One Plus

(0)

Cloud-based full RCM software for Medical Billing

visit website
Mercury One is a cloud-based medical practice management solution designed for large service bureaus, hospital ancillary services, and healthcare providers that helps automate back-office administration, analyze patient histories, and handle medical billing on a centralized platform.

Read more about Mercury One Plus

Users also considered
RXNT logo

RXNT

Category Leaders

Cloud-based Practice Management, EHR, and eRx Software

visit website
RXNT's cloud-based Medical Billing system is intuitive, customizable, and flexible. Manage the entire claims process, from charge capture to full reimbursement, with single sign-on for CBOs. Assign ICD-10 codes, auto-checks and ERAs, configurable reporting, online patient bill pay, and mobile apps.

Read more about RXNT

Users also considered
Service Center logo

Service Center

Simplify Medical Billing with Office Ally Service Center

visit website
Service Center Clearinghouse is a cloud-based platform that helps users streamline medical coding and insurance billing using Service Center, the advanced clearinghouse from Office Ally.

Read more about Service Center

Users also considered
HARMONY Medical logo

HARMONY Medical

Fully integrated HIPPA compliant practice management

visit website
Harmony is a fully integrated HIPPA compliant practice management software with color-coded scheduling, comprehensive insurance and patient billing

Read more about HARMONY Medical

Users also considered
Euclid logo

Euclid

Medical practice management system to process claims.

visit website
Welcome to our cutting-edge medical billing processing platform, where we have redefined the way healthcare organizations handle their billing procedures. We have meticulously designed our platform to streamline the entire medical billing process, eliminating bottlenecks and saving you time.

Read more about Euclid

Users also considered
gGastro logo

gGastro

Cloud-based gGastro® EHR for gastroenterologists.

visit website
Integrated with practice management software, ModMed® gBOOSTTM revenue cycle management services help streamline billing processes.

Read more about gGastro

Users also considered
CharmHealth logo

CharmHealth

Category Leaders

AI-based healthcare platform for medical practices

visit website
CharmHealth is an AI-based healthcare platform offering electronic health records, practice management, and medical billing solutions for medical practices of all sizes. The system features an AI scribe that automates documentation during patient encounters and integrates with pharmacies, labs, and devices. The platform includes patient engagement tools that allow individuals to schedule appointments, access records, and manage their healthcare information.

Read more about CharmHealth

Users also considered
SimplePractice logo

SimplePractice

Appointment scheduling and reminder solution

visit website
SimplePractice is an all-in-one practice management solution that helps businesses simplify administrative tasks, such as scheduling, billing, and documentation, allowing health and wellness professionals to focus on providing excellent client care. The platform offers a robust set of features designed to help practitioners thrive.

Read more about SimplePractice

Users also considered
TherapyNotes, LLC logo

TherapyNotes, LLC

Online mental health EMR and practice management software.

visit website
Web-based practice management & electronic health records (EHR) software for behavioral health with thousands of active users, and unlimited customer support.

Read more about TherapyNotes, LLC

Users also considered
ChiroFusion logo

ChiroFusion

Complete Practice Management for Chiropractors

visit website
ChiroFusion offers an affordable, reliable, and complete practice management solution specifically for Chiropractors.

Read more about ChiroFusion

Users also considered
Tebra logo

Tebra

Automated solution for medical practice management

visit website
Tebra helps medical providers optimize clinical processes by handling administrative tasks so that doctors can focus on patient care

Tebra is popular with physician practices with 1-10 providers and medical billing companies with 1-100 providers.

Read more about Tebra

Users also considered
EHR YOUR WAY logo

Streamlined care for mental health professionals.

EHR YOUR WAY is a fully integrated behavioral health and clinical care EHR software. It is configurable for mental health and clinical health specific needs and is an ONC certified cloud-based EHR. EHR YOUR WAY is trusted by mental health professionals nationwide and is suitable for behavioral health agencies with 15 or more users.

Read more about EHR YOUR WAY

Users also considered
Jane logo
Category Leaders

Practice management software designed by real clinic owners.

Jane is a cloud-based practice management software designed to help health and wellness practitioners manage online booking, scheduling, billing, and more.

Read more about Jane

Users also considered
Pabau logo

Practice management system for healthcare

Pabau is an all-in-one practice management software designed for healthcare businesses. The system offers digital patient records, online booking capabilities, calendar management, and integrated payment processing to streamline administrative workflows. Pabau also includes marketing tools, inventory management, and reporting features that help medical practices operate efficiently while maintaining secure patient data.

Read more about Pabau

Users also considered
TheraNest logo

Mental health practice management solution

TheraNest is HITRUST certified and fully compliant with HIPAA, offering peace of mind. With features like multi-location management, advanced billing automation, and robust reporting, it streamlines operations at scale, keeping teams connected, efficient, and compliant.

Read more about TheraNest

Users also considered
Carepatron logo
Category Leaders

The healthcare workspace for small teams and their clients.

All your healthcare work in one place: Notes, Clients records, Appointments, Billing, Payments, Transcription, Communication & more.

Read more about Carepatron

Users also considered
IntakeQ logo

Web-based intake forms management software

IntakeQ is an online intake form solution that enables healthcare professionals to securely exchange electronic forms with their patients prior to appointments

Read more about IntakeQ

Users also considered
NextGen Office logo
Category Leaders

Empowering our clients to make healthcare better

NextGen Financial Suite is a revenue-boosting platform that includes revenue cycle management services and medical billing services to help your practice collect every dollar you earn. Our predictive rules engine ensures that 98% of claims are accepted and paid after the first submission.

Read more about NextGen Office

Users also considered
Qualifacts Insync logo

Cloud-based EHR and practice management software.

Improve patient care with Qualifacts InSync's integrated, user-friendly, cloud-based EHR solution tailored to your practice. Includes EHR, practice management, billing, telemedicine, e-prescribing, and patient portal for practices of any size.

Read more about Qualifacts Insync

Users also considered
Epic logo
Category Leaders

Modular, cloud-based ambulatory EMR software

EpicCare is a physician-friendly EMR platform designed to help organize patient data and optimize workflows with tools for chart review, orders, and more

Read more about Epic

Users also considered
NueMD logo

Electronic health record software for medical practitioners

NueMD helps medical practices streamline the administrative operations to spend more time with patients and less time on paperwork. It helps create patient records, scan and attach insurance and ID cards and instantly verify insurance eligibility.

Read more about NueMD

Users also considered

Key features for Medical Billing software

Based on GetApp's analysis of verified user reviews collected between July 2021 and August 2024.

  • Billing & Invoicing: Reviewers appreciate easy invoice generation, effective tracking of payments, quick billing processes, and efficient customer support. 99% of reviewers rated this feature as important or highly important.
  • Charting: Users value customizable templates, ease of documentation, and the ability to streamline workflows and save time. 97% of reviewers rated this feature as important or highly important.
  • Appointment Management: Users find the scheduling features flexible and easy to use, with automated reminders and efficient rescheduling options. 97% of reviewers rated this feature as important or highly important.
  • Claims Management: Reviewers emphasize the importance of automated claims processing, easy tracking, and seamless integration with insurance companies. 95% of reviewers rated this feature as important or highly important.
  • Practice Management: Users appreciate the comprehensive reports, ease of use, integrated billing, and overall efficiency in managing day-to-day operations. 90% of reviewers rated this feature as important or highly important.